DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkca

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_031750036.1 Gene:prkca / 780209 XenbaseID:XB-GENE-5942870 Length:692 Species:Xenopus tropicalis


Alignment Length:680 Identity:310/680 - (45%)
Similarity:399/680 - (58%) Gaps:132/680 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC 226
            |:||:|:: ||:|..|||:|.|.:||||||||.:||||.||||:|||||..||||:||..|...|
 Frog    26 RKGALRQKNVHEVKNHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFTC 90

  Fly   227 PGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHK 291
            || .|:.|...:  |..:       |:|.:|:|...||||||||||||||.||::||||.|||||
 Frog    91 PG-ADKGPDTDD--PRSK-------HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCETCDMNVHK 145

  Fly   292 RCQKNVANTCGIN---------------------------------------------------- 304
            .|..||.:.||::                                                    
 Frog   146 VCVINVPSLCGMDHTEKRGRIYLKAEVKGDVLNVIVRDAKNLIPMDPNGLSDPYVKLKLIPDPKN 210

  Fly   305 -----TKQMAEILS---------------------------------------SLGISPDKQQPR 325
                 ||.....|:                                       |.|:|...:.|.
 Frog   211 ESKKKTKTFRSTLNPQWNECFTFKLKPTDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPA 275

  Fly   326 RS--KYLNQQGGEDNYGASLGA---DGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLA 385
            ..  |.|||:.|| .|...:..   ||:....|.|.....:.|.:......          ..|.
 Frog   276 CGWYKLLNQEEGE-YYNVPIPEEEDDGNIELRQKFEGTVPARDKVVPPVQK----------AKLG 329

  Fly   386 VTGSGGVGATGETRP-------GKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDA 443
            ..|:..:..|.|.||       ....|.||:|:.||||||||||||||:||.||::|||:||||.
 Frog   330 PAGNKVISPTDERRPYVPSNNIDSVRLTDFSFLMVLGKGSFGKVMLAERKGADELFAIKILKKDV 394

  Fly   444 IIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASR 508
            :||||||:|||.|||:|||....||||.|||||||.|||:||||||||||||:.||:..:|:..:
 Frog   395 VIQDDDVECTMVEKRVLALQGKPPFLTHLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ 459

  Fly   509 AAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDY 573
            |.|||||:::.|.|||..|::||||||||::||.|||.|:||||||||.:::|:.|.||||||||
 Frog   460 AVFYAAEISVGLFFLHKKGIVYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDY 524

  Fly   574 IAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSIL 638
            |||||:..|.||.||||||.|||:|||:||||||:.::|||||.|||..:|.||..:|:|||||.
 Frog   525 IAPEIIAYQPYGRSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSMSKEAVSIC 589

  Fly   639 KGFLTKNPEQRLGCTGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKE 702
            ||.:||:|.:||||..: |.:||:|.||.::||::|:.|.|:|||:||:.. :.|.|||..||:.
 Frog   590 KGLMTKHPVKRLGCGPEGERDIREHTFFRRIDWEKLQNREIQPPFKPKVCG-KGAENFDKFFTRG 653

  Fly   703 DPVLTPIGNEVVRCINQDEFAGFSFVNPKF 732
            .|||||....|:..|:|.:|.|||::||:|
 Frog   654 QPVLTPPDQLVIANIDQADFEGFSYINPQF 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 34/50 (68%)
C1_1 252..304 CDD:278556 34/51 (67%)
STKc_nPKC_epsilon 412..729 CDD:270743 198/317 (62%)
prkcaXP_031750036.1 C1_cPKC_rpt1 39..96 CDD:410383 37/57 (65%)
C1_cPKC_rpt2 106..159 CDD:410386 34/52 (65%)
C2_PKC_alpha_gamma 163..293 CDD:175992 14/130 (11%)
STKc_cPKC_alpha 348..688 CDD:270766 205/337 (61%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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