DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcd

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_002934267.1 Gene:prkcd / 733756 XenbaseID:XB-GENE-478663 Length:683 Species:Xenopus tropicalis


Alignment Length:701 Identity:301/701 - (42%)
Similarity:422/701 - (60%) Gaps:59/701 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PYVSIDVDES-HFDRATT---RPKTFDPVWNEQFVHDVTNVSNINLTVFHDAALPPDDFVANCII 100
            |:.::.|.|| ..:|..|   :..|..|.|...|...:.....|.:.:...|..|..:......:
 Frog    26 PFCAVKVKESLTTERGKTLVQKKPTMYPDWKSPFDAHIYEGRVIQIVLMKAAEDPLSEATVGVSV 90

  Fly   101 SFEDLMQSETAVQDLWVNLEPQGKIHVIIELKNRTDKAKAEAVVEHTVAVNKEFKERAGFNRRRG 165
            ..|...:. ....:.|::|:||.|  |::.::...:.|..::.|       :|.:.....|||||
 Frog    91 LAERCKKG-NGKSEFWLDLQPQAK--VLMSVQYFLEDADLKSSV-------REDEGLVTINRRRG 145

  Fly   166 AMRR-RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKCPG- 228
            |::: ::|.:..|:|:|||..||||||.||:|:||:.||||:|:.|...:||||...::.:|.| 
 Frog   146 AIKQAKIHYIKNHEFIATFFGQPTFCSVCRDFVWGLNKQGYKCRQCNAAIHKKCIEMIIGRCTGT 210

  Fly   229 ---MRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVH 290
               .||....|       :|||:::||||.|::||..||||||||||:||:||||:|:.|.||||
 Frog   211 AANSRDTMFQK-------ERFNIDMPHRFKVYNYKSPTFCDHCGSLLWGLVKQGLKCDECAMNVH 268

  Fly   291 KRCQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLGADGDGAPGQSF 355
            .:||..|||.||||.|.:||.|:.:.:   |...|:|     ..|.||.....|.: ...||...
 Frog   269 HKCQNKVANLCGINQKLLAEALNQVSM---KSSSRKS-----DSGLDNIAIYQGVN-PKTPGLPM 324

  Fly   356 RSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFG 420
                  .|:.......:..|.:....:||:               .:..:.:|.|.|||||||||
 Frog   325 ------PDATDNQYDRLWEGSSPHPHISLS---------------SRLKIDNFVFHKVLGKGSFG 368

  Fly   421 KVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFV 485
            ||:|||.||..|.:|||.||||.::.||||:|||.|||:||||..:||||.::..|||.:.||||
 Frog   369 KVLLAELKGKGEYFAIKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHIYCSFQTKEHLFFV 433

  Fly   486 MEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLAD 550
            ||::|||||||.||...||:..||.|||:|:...|||||:.|:|||||||||::||::||.|:||
 Frog   434 MEFLNGGDLMFHIQDKGRFDLYRATFYASEIICGLQFLHSKGIIYRDLKLDNVMLDKDGHIKIAD 498

  Fly   551 FGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDEL 615
            ||||||.:......:||||||||||||||:..:|..|||||:.|||:|||:.||.||..|:||||
 Frog   499 FGMCKENVYGDNKASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL 563

  Fly   616 FDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDENEIRKHPFFAKLDWKELEKRNIKP 680
            |:||..|...||.|:::|:..||:....:.|.:|||..|:   |:.||||..::|..||:|.::|
 Frog   564 FESIRQDTPHYPRWITKESKDILERLFEREPTKRLGVVGN---IKVHPFFKTINWTALERRELEP 625

  Fly   681 PFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNPK 731
            ||:||:|:|.|.:|||.||..|.|.|:.....::..::|..|.||||:|||
 Frog   626 PFKPKVKSPSDYSNFDREFLSEKPRLSFSDKNLIDSMDQSAFHGFSFINPK 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981 20/97 (21%)
C1_1 177..228 CDD:278556 27/50 (54%)
C1_1 252..304 CDD:278556 35/51 (69%)
STKc_nPKC_epsilon 412..729 CDD:270743 177/316 (56%)
prkcdXP_002934267.1 C1_1 158..207 CDD:365894 26/48 (54%)
C1_1 230..280 CDD:365894 33/49 (67%)
STKc_nPKC_delta 360..675 CDD:173710 177/317 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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