DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and PRKCA

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_002728.2 Gene:PRKCA / 5578 HGNCID:9393 Length:672 Species:Homo sapiens


Alignment Length:666 Identity:314/666 - (47%)
Similarity:404/666 - (60%) Gaps:114/666 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NR--RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSV 222
            ||  |:||:|:: ||:|..|||:|.|.:||||||||.:||||.||||:|||||..||||:||..|
Human    18 NRFARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFV 82

  Fly   223 VSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGM 287
            ...||| .|:.|...:  |..:       |:|.:|:|...||||||||||||||.||::|:||.|
Human    83 TFSCPG-ADKGPDTDD--PRSK-------HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDM 137

  Fly   288 NVHKRCQKNVANTCGINTKQ-------MAEILS--------------------------SLGISP 319
            ||||:|..||.:.||::..:       .||:..                          .|.:.|
Human   138 NVHKQCVINVPSLCGMDHTEKRGRIYLKAEVADEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIP 202

  Fly   320 DKQQPRRSK------YLNQQGGEDNYGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTS---- 374
            |.:...:.|      .||.|..|........:|.|.         .|||:......||...    
Human   203 DPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDR---------RLSVEIWDWDRTTRNDFMGS 258

  Fly   375 -GYNSSSCMSLAVTG---------------------------------SGGVGATG-------ET 398
             .:..|..|.:..:|                                 ...:|..|       |.
Human   259 LSFGVSELMKMPASGWYKLLNQEEGEYYNVPIPEGDEEGNMELRQKFEKAKLGPAGNKVISPSED 323

  Fly   399 RP------GKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEK 457
            |.      .:..|.||||:.|||||||||||||::|||:|:||||:||||.:||||||:|||.||
Human   324 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 388

  Fly   458 RILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQF 522
            |:|||....||||.|||||||.|||:||||||||||||:.||:..:|:..:|.|||||:::.|.|
Human   389 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 453

  Fly   523 LHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGAS 587
            ||..|:|||||||||::||.|||.|:||||||||.:|:|:.|.|||||||||||||:..|.||.|
Human   454 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKS 518

  Fly   588 VDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGC 652
            |||||.|||:|||:||||||:.::|||||.|||..:|.||..||:||||:.||.:||:|.:||||
Human   519 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSVCKGLMTKHPAKRLGC 583

  Fly   653 TGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRC 716
            ..: |.::|:|.||.::||::||.|.|:|||:||:.. :.|.|||..||:..|||||....|:..
Human   584 GPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCG-KGAENFDKFFTRGQPVLTPPDQLVIAN 647

  Fly   717 INQDEFAGFSFVNPKF 732
            |:|.:|.|||:|||:|
Human   648 IDQSDFEGFSYVNPQF 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 34/50 (68%)
C1_1 252..304 CDD:278556 33/51 (65%)
STKc_nPKC_epsilon 412..729 CDD:270743 200/317 (63%)
PRKCANP_002728.2 C1_1 37..89 CDD:278556 36/52 (69%)
C1_1 102..154 CDD:278556 33/51 (65%)
C2_PKC_alpha_gamma 159..289 CDD:175992 20/138 (14%)
STKc_cPKC_alpha 328..668 CDD:270766 209/337 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.950

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