DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcaa

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_021332537.1 Gene:prkcaa / 497384 ZFINID:ZDB-GENE-050208-100 Length:679 Species:Danio rerio


Alignment Length:681 Identity:315/681 - (46%)
Similarity:395/681 - (58%) Gaps:135/681 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NR--RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSV 222
            ||  |:||:|:: ||:|..|||.|.|.:||||||||.:||||.||||:|||||..||||:||..|
Zfish    16 NRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHELV 80

  Fly   223 VSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGM 287
            ...||| .|:.|...:  |..:       |:|.:|:|...||||||||||||||.||::|::|.|
Zfish    81 TFSCPG-ADKGPDTDD--PRSK-------HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDSCDM 135

  Fly   288 NVHKRCQKNVANTCGIN------------------------------------------------ 304
            ||||:|..||.:.||.:                                                
Zfish   136 NVHKQCVMNVPSLCGTDHTERRGRLYMKIEVIGDKMHVTVGEGKNLIPMDPNGLSDPYVKLKLIP 200

  Fly   305 -----TKQMAE-ILSSL------------------------------------------GISPDK 321
                 |||..: |.|||                                          |:|...
Zfish   201 DPKNETKQKTKTIRSSLNPTWNETFTFKLKPADKDRRLAVEVWDWDRTTRNDFMGSMSFGVSELM 265

  Fly   322 QQPRRS--KYLNQQGGEDNYGASL--GADGDGAPGQSFRSCAL----SVDSLATSTTTMTSGYNS 378
            :.|...  |.|||:.|| .|...:  ..|.|....|.|....|    .:..|......:|:..:|
Zfish   266 KSPVCGWYKMLNQEEGE-YYNVPIPDEDDPDTELRQKFEDETLEDLEQIAKLGPPKKNITALDDS 329

  Fly   379 SSCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDA 443
            .|    ::|.|         ......|.||||:.||||||||||||||.|.:||::|||:||||.
Zfish   330 GS----SITSS---------NVDNVRLSDFNFLAVLGKGSFGKVMLAEMKSSDELFAIKILKKDV 381

  Fly   444 IIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASR 508
            :||||||:|||.|||:||.....||||.|||||||.|||:||||||||||||:.||:..:|:..:
Zfish   382 VIQDDDVECTMVEKRVLAQQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ 446

  Fly   509 AAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDY 573
            |.|||||:.:.|.|||..|:|||||||||::||.|||.|:||||||||.|:.|:.|.||||||||
Zfish   447 AVFYAAEIAVGLFFLHKKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIVEGVTTRTFCGTPDY 511

  Fly   574 IAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSIL 638
            |||||:..|.||.||||||.|||:|||:||||||:.::|||||.|||..:|.|...||:|||||.
Zfish   512 IAPEIIAYQPYGRSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYSKTLSKEAVSIC 576

  Fly   639 KGFLTKNPEQRLGCTGDENE--IRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTK 701
            ||.:||:|.:|||| |.|.|  ||:|.||.::||..|..|.::|||:||:.. :.|.|||..||:
Zfish   577 KGLMTKHPSKRLGC-GQEGERDIREHAFFRRIDWDRLANREVQPPFKPKVCG-KGAENFDKFFTR 639

  Fly   702 EDPVLTPIGNEVVRCINQDEFAGFSFVNPKF 732
            ..|.|||....|:..|:|.:|.||:||||:|
Zfish   640 TQPQLTPPDELVIANIDQADFDGFTFVNPQF 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 34/50 (68%)
C1_1 252..304 CDD:278556 32/51 (63%)
STKc_nPKC_epsilon 412..729 CDD:270743 198/318 (62%)
prkcaaXP_021332537.1 C1_1 35..87 CDD:278556 36/52 (69%)
C1_1 100..150 CDD:278556 30/49 (61%)
C2_PKC_alpha_gamma 157..287 CDD:175992 17/130 (13%)
STKc_cPKC_alpha 335..675 CDD:270766 208/347 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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