DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcaa

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_021332537.1 Gene:prkcaa / 497384 ZFINID:ZDB-GENE-050208-100 Length:679 Species:Danio rerio


Alignment Length:681 Identity:315/681 - (46%)
Similarity:395/681 - (58%) Gaps:135/681 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NR--RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSV 222
            ||  |:||:|:: ||:|..|||.|.|.:||||||||.:||||.||||:|||||..||||:||..|
Zfish    16 NRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHELV 80

  Fly   223 VSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGM 287
            ...||| .|:.|...:  |..:       |:|.:|:|...||||||||||||||.||::|::|.|
Zfish    81 TFSCPG-ADKGPDTDD--PRSK-------HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDSCDM 135

  Fly   288 NVHKRCQKNVANTCGIN------------------------------------------------ 304
            ||||:|..||.:.||.:                                                
Zfish   136 NVHKQCVMNVPSLCGTDHTERRGRLYMKIEVIGDKMHVTVGEGKNLIPMDPNGLSDPYVKLKLIP 200

  Fly   305 -----TKQMAE-ILSSL------------------------------------------GISPDK 321
                 |||..: |.|||                                          |:|...
Zfish   201 DPKNETKQKTKTIRSSLNPTWNETFTFKLKPADKDRRLAVEVWDWDRTTRNDFMGSMSFGVSELM 265

  Fly   322 QQPRRS--KYLNQQGGEDNYGASL--GADGDGAPGQSFRSCAL----SVDSLATSTTTMTSGYNS 378
            :.|...  |.|||:.|| .|...:  ..|.|....|.|....|    .:..|......:|:..:|
Zfish   266 KSPVCGWYKMLNQEEGE-YYNVPIPDEDDPDTELRQKFEDETLEDLEQIAKLGPPKKNITALDDS 329

  Fly   379 SSCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDA 443
            .|    ::|.|         ......|.||||:.||||||||||||||.|.:||::|||:||||.
Zfish   330 GS----SITSS---------NVDNVRLSDFNFLAVLGKGSFGKVMLAEMKSSDELFAIKILKKDV 381

  Fly   444 IIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASR 508
            :||||||:|||.|||:||.....||||.|||||||.|||:||||||||||||:.||:..:|:..:
Zfish   382 VIQDDDVECTMVEKRVLAQQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ 446

  Fly   509 AAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDY 573
            |.|||||:.:.|.|||..|:|||||||||::||.|||.|:||||||||.|:.|:.|.||||||||
Zfish   447 AVFYAAEIAVGLFFLHKKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIVEGVTTRTFCGTPDY 511

  Fly   574 IAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSIL 638
            |||||:..|.||.||||||.|||:|||:||||||:.::|||||.|||..:|.|...||:|||||.
Zfish   512 IAPEIIAYQPYGRSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYSKTLSKEAVSIC 576

  Fly   639 KGFLTKNPEQRLGCTGDENE--IRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTK 701
            ||.:||:|.:|||| |.|.|  ||:|.||.::||..|..|.::|||:||:.. :.|.|||..||:
Zfish   577 KGLMTKHPSKRLGC-GQEGERDIREHAFFRRIDWDRLANREVQPPFKPKVCG-KGAENFDKFFTR 639

  Fly   702 EDPVLTPIGNEVVRCINQDEFAGFSFVNPKF 732
            ..|.|||....|:..|:|.:|.||:||||:|
Zfish   640 TQPQLTPPDELVIANIDQADFDGFTFVNPQF 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 39/58 (67%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 32/53 (60%)
STKc_nPKC_epsilon 412..729 CDD:270743 198/318 (62%)
prkcaaXP_021332537.1 C1_cPKC_rpt1 33..90 CDD:410383 37/57 (65%)
C1_cPKC_rpt2 100..153 CDD:410386 32/52 (62%)
C2_PKC_alpha_gamma 157..287 CDD:175992 17/130 (13%)
STKc_cPKC_alpha 335..675 CDD:270766 208/347 (60%)
Blue background indicates that the domain is not in the aligned region.

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