DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and Pkc53E

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster


Alignment Length:717 Identity:308/717 - (42%)
Similarity:389/717 - (54%) Gaps:179/717 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 AKAEAVVEHTVAVNKEFKERAGFNRRRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFI---- 197
            |:.|||.|:      :.|.|.    |:||:::: |..|..|.|:|.|.:||||||||::||    
  Fly    16 AEGEAVGEN------KMKSRL----RKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQ 70

  Fly   198 ----W-GIGKQGYQCQVCTLVVHKKCHLSVVSKCPGMR---DEQPAKVEMVPAGQRFNVNLPHRF 254
                | |.||||:|||||:.||||:||..|...|||..   |....|.:             |.|
  Fly    71 SGYAWMGFGKQGFQCQVCSYVVHKRCHEYVTFICPGKDKGIDSDSPKTQ-------------HNF 122

  Fly   255 VVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCG-------------INTK 306
            ...:|...||||||||||||:..|||:|..|.||||.||::||.:.||             ||.|
  Fly   123 EPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVK 187

  Fly   307 ------QMAEILSSLGISP---------------DKQQPRRS----------------------- 327
                  |:.|..:.:.:.|               ||.|.::.                       
  Fly   188 ENLLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPE 252

  Fly   328 -----------------------------------------KYLNQQGGEDNYGASLGADGDG-- 349
                                                     |.|.|..|| .|......|...  
  Fly   253 DKDRRILIEVWDWDRTSRNDFMGALSFGISEIIKNPTNGWFKLLTQDEGE-YYNVPCADDEQDLL 316

  Fly   350 ----APGQS----FRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLL 406
                .|.|.    .||          .|.|.||.....            :.||           
  Fly   317 KLKQKPSQKKPMVMRS----------DTNTHTSSKKDM------------IRAT----------- 348

  Fly   407 DFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTA 471
            ||||||||||||||||:|||:||::|:||||:||||.|||||||:|||.|||:|||....|||..
  Fly   349 DFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQ 413

  Fly   472 LHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLD 536
            |||||||.||||||||||||||||||||:..:|:...|.|||||:...|.||||.|::|||||||
  Fly   414 LHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLD 478

  Fly   537 NILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMM 601
            |:|||.:||.|:||||||||.|:....|.|||||||||||||:..|.||.||||||.|||:|||:
  Fly   479 NVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEML 543

  Fly   602 AGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGC-TGDENEIRKHPFF 665
            .|||||:.::|:|||.:|...:|.||..||:||....||||||.|.:|||| :..|.::|.||||
  Fly   544 VGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFF 608

  Fly   666 AKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNP 730
            .::||:::|.|.::|||:||:|:.:|.:|||.:||.|...|||.....:..::|.||.|||::||
  Fly   609 RRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKVFMMNLDQSEFVGFSYMNP 673

  Fly   731 KF 732
            ::
  Fly   674 EY 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 37/67 (55%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 30/66 (45%)
STKc_nPKC_epsilon 412..729 CDD:270743 196/317 (62%)
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 35/65 (54%)
C1_cPKC_rpt2 120..173 CDD:410386 30/52 (58%)
C2_PKC_alpha_gamma 177..307 CDD:175992 15/130 (12%)
STKc_cPKC 353..672 CDD:270739 197/318 (62%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.