DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and aPKC

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:642 Identity:238/642 - (37%)
Similarity:328/642 - (51%) Gaps:158/642 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 MQSETAVQDLWVNLEPQGKIHVIIELKNRTDKAKAEAVVEHTVAVNKEFKERAGFNRRRGAMR-R 169
            :|||..::..:..:.|.                     |.....::.:.::|:.:  ||||.| |
  Fly   449 LQSEEEIEPAYATVFPN---------------------VPQAPGLSCDGEDRSIY--RRGARRWR 490

  Fly   170 RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC-----PGM 229
            ::::||||.|.|....:..||::|::.|||:|:||::|..|.|:||||||..|...|     |.:
  Fly   491 KLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLVQKHCTDQPEPLV 555

  Fly   230 RDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQ 294
            ::......:.:|      |.||                  .|.|..:..|  .|.|..:.|    
  Fly   556 KERAEESSDPIP------VPLP------------------PLPYEAMSGG--AEACETHDH---- 590

  Fly   295 KNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLGADGDGAPGQSFRSCA 359
                          |.|::    .|..:.|.      :.|.:..|                    
  Fly   591 --------------AHIVA----PPPPEDPL------EPGTQRQY-------------------- 611

  Fly   360 LSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVML 424
                                                        ||.||..|:|:|:||:.||::
  Fly   612 --------------------------------------------SLNDFELIRVIGRGSYAKVLM 632

  Fly   425 AEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYV 489
            .|.:.|..|||:||:||..:..|:|:|...|||.:...|:|||||..||||||||.|||||:|:|
  Fly   633 VELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFV 697

  Fly   490 NGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMC 554
            .|||||:.:|:.||.....|.|||||::|||.|||..|:|||||||||:|||.|||.||.|:|||
  Fly   698 RGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMC 762

  Fly   555 KEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPF---------EAD 610
            ||||..|..|:||||||:|||||||:.::||.||||||||||:|||:||:.||         :.:
  Fly   763 KEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQN 827

  Fly   611 NEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDE--NEIRKHPFFAKLDWKEL 673
            .||.||..|:...:..|..||..|.|:|||||.|||..||||..:.  .:|..||||..:||:.|
  Fly   828 TEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELL 892

  Fly   674 EKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNP 730
            |::.:.|||:|::.:.||..||..|||.|...|||..:.|:..|:|.||.||.:|||
  Fly   893 ERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYVNP 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981 4/27 (15%)
C1_1 177..228 CDD:278556 23/55 (42%)
C1_1 252..304 CDD:278556 6/51 (12%)
STKc_nPKC_epsilon 412..729 CDD:270743 175/327 (54%)
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 23/51 (45%)
S_TKc 616..884 CDD:214567 149/267 (56%)
STKc_aPKC 620..947 CDD:270740 175/326 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452318
Domainoid 1 1.000 296 1.000 Domainoid score I225
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46471
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.000

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