DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcbb

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_957272.1 Gene:prkcbb / 393953 ZFINID:ZDB-GENE-040426-1178 Length:670 Species:Danio rerio


Alignment Length:688 Identity:317/688 - (46%)
Similarity:413/688 - (60%) Gaps:136/688 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 NKEFKERA----GFNRRRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVC 210
            |.:.:||:    || .|:||:|:: ||:|..|||:|.|.:||||||||.:||||.||||:|||||
Zfish     6 NSDGEERSAPMRGF-ARQGALRQKNVHEVKNHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVC 69

  Fly   211 TLVVHKKCHLSVVSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGL 275
            ..||||:||..|...||| .|:.||..:  |..:       |:|.||:|...|||||||||||||
Zfish    70 CFVVHKRCHEFVTFSCPG-ADKGPASDD--PRSK-------HKFKVHTYSSPTFCDHCGSLLYGL 124

  Fly   276 IKQGLQCETCGMNVHKRCQKNVANTCGINTKQ-------MAEILSSL-----------------G 316
            |.||::|:.|.||:||||..||.:.||.:..:       .|||.:::                 |
Zfish   125 IHQGMRCDHCMMNIHKRCVANVPSLCGTDHTERRGRIQITAEIKNNVLTVSIKEAKNLVPMDPNG 189

  Fly   317 IS-----------PDKQQPRRSKYL-------------------------------------NQQ 333
            :|           |..:..:::|.:                                     |..
Zfish   190 LSDPYVKLKLIPDPKSESKQKTKTIKCCLNPTWNETFTFNLKESDKDRRLSVEIWDWDLTSRNDF 254

  Fly   334 GGEDNYGAS----LGADG-------------------DGAPG-----QSFRSCALSVDSLATSTT 370
            .|..::|.|    .|.||                   :|..|     |.|....:.......|::
Zfish   255 MGSLSFGISELQKQGVDGWFKLLSQEEGEYFNVPVPPEGEEGNEELRQKFERAKIGPSKTDGSSS 319

  Fly   371 TMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYA 435
            ...|.::|:.                  ...:..|.||||:.||||||||||||||:||.||::|
Zfish   320 NAISKFDSNG------------------NRDRMKLSDFNFLMVLGKGSFGKVMLAERKGADELFA 366

  Fly   436 IKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQK 500
            ||:||||.:||||||:|||.|||:|||:...||||.|||||||.|||:|||||:||||||:.||:
Zfish   367 IKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYINGGDLMYHIQQ 431

  Fly   501 ARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTT 565
            ..:|:...|.|||||:.:.|.|||:.|||||||||||::||.|||.|:||||||||.:::|:.|.
Zfish   432 VGKFKEPHAVFYAAEIAIGLFFLHSKGVIYRDLKLDNVMLDAEGHIKIADFGMCKENMLDGVTTK 496

  Fly   566 TFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWL 630
            |||||||||||||:..|.||.||||||.|||:|||:||||||:.::|||||.|||...|.||..:
Zfish   497 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHHVSYPKSM 561

  Fly   631 SREAVSILKGFLTKNPEQRLGCTGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANN 694
            |:|||:|.||.:||:|.:||||..: |.:||:|.||..:||::||.|.::|||:||... |||.|
Zfish   562 SKEAVAICKGLMTKHPGKRLGCGPEGERDIREHGFFRYMDWEKLEHREVQPPFKPKACG-RDAEN 625

  Fly   695 FDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNPKF 732
            ||..||:..|||||...||:..::||||.||||:||:|
Zfish   626 FDRFFTRHPPVLTPPDQEVIMNLDQDEFEGFSFINPEF 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 39/58 (67%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 33/53 (62%)
STKc_nPKC_epsilon 412..729 CDD:270743 203/317 (64%)
prkcbbNP_957272.1 C1_cPKC_rpt1 34..91 CDD:410383 37/57 (65%)
C1_cPKC_rpt2 101..154 CDD:410386 33/52 (63%)
C2_PKC_alpha_gamma 158..288 CDD:175992 14/129 (11%)
STKc_cPKC_beta 338..660 CDD:270767 207/322 (64%)
Blue background indicates that the domain is not in the aligned region.

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