DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and Rps6ka4

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001101987.2 Gene:Rps6ka4 / 361715 RGDID:1307277 Length:773 Species:Rattus norvegicus


Alignment Length:341 Identity:134/341 - (39%)
Similarity:205/341 - (60%) Gaps:15/341 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 KCSLLDFNFIKVLGKGSFGKVMLAEKKG---TDEIYAIKVLKKDAIIQDDDV-DCTMTEKRILAL 462
            |.|:.:|..:||||.|::|||.|..|.|   ..::||:|||:|.|::|.... :.|.||:.:|.|
  Rat    27 KVSVENFALLKVLGTGAYGKVFLVRKAGGHDAGKLYAMKVLRKAALVQRAKTQEHTRTERSVLEL 91

  Fly   463 AANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHG 527
            ....|||..||..|||..:|..:::||:||::...:.:.:.|:.:....|..|:.|||:.||..|
  Rat    92 VRQAPFLVTLHYAFQTDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYGGEIVLALEHLHKLG 156

  Fly   528 VIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGM-LTTTFCGTPDYIAPEILKEQE-YGASVDW 590
            :|||||||:|:|||.|||..|.|||:.||.:.... .|.:||||.:|:||||::.:. :|.:|||
  Rat   157 IIYRDLKLENVLLDSEGHIVLTDFGLSKEFLTEEKERTFSFCGTIEYMAPEIIRSKAGHGKAVDW 221

  Fly   591 WALGVLMYEMMAGQPPF----EADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLG 651
            |:||:|::|::.|..||    |.:.:.|:...|:.....:|..:...|..:|:..|.|:|::|||
  Rat   222 WSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRLLCKDPKKRLG 286

  Fly   652 CTGDE--NEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVV 714
             .|.:  .|::.|.||..|||..|..|.|..||||::::..|..||..|||:.:||.:|.|:...
  Rat   287 -AGPQGAQEVKSHLFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPVYSPAGSPPP 350

  Fly   715 RCINQDEFAGFSFVNP 730
            .  :...|.|:|||.|
  Rat   351 G--DPRIFQGYSFVAP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 129/328 (39%)
Rps6ka4NP_001101987.2 STKc_MSK2_N 32..364 CDD:270765 131/334 (39%)
Protein Kinases, catalytic domain 404..714 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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