DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and Rps6ka5

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001382521.1 Gene:Rps6ka5 / 314384 RGDID:1308336 Length:798 Species:Rattus norvegicus


Alignment Length:379 Identity:144/379 - (37%)
Similarity:212/379 - (55%) Gaps:42/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 GSGGVGATGETRPG---------------------KCSLLDFNFIKVLGKGSFGKVMLAEK-KGT 430
            ||||.|.:|::..|                     |..:.:|..:||||.|::|||.|..| .|.
  Rat     7 GSGGAGTSGDSGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGH 71

  Fly   431 D--EIYAIKVLKKDAIIQD-DDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGG 492
            |  ::||:|||||..|:|. ...:.|.||:::|......|||..||..|||..:|..:::|:|||
  Rat    72 DAGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 136

  Fly   493 DLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEG 557
            :|...:.:..||.......|..|:.|||:.||..|:||||:||:|||||..||..|.|||:.||.
  Rat   137 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 201

  Fly   558 IMN-GMLTTTFCGTPDYIAPEILKEQEYG--ASVDWWALGVLMYEMMAGQPPFEADNED----EL 615
            :.: .....:||||.:|:||:|::..:.|  .:||||:|||||||::.|..||..|.|.    |:
  Rat   202 VADEAERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 266

  Fly   616 FDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGC-TGDENEIRKHPFFAKLDWKELEKRNIK 679
            ...|:..:..||..:|..|..:|:..|.|:|::|||| ..|..||::|.||.|::|.:|..:.:.
  Rat   267 SRRILKSEPPYPQGMSSVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFEKINWDDLAAKKVP 331

  Fly   680 PPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDE---FAGFSFVNP 730
            .||:|.:::..|.:||..|||:.||..:|      ..:.|..   |.|:|||.|
  Rat   332 APFKPVIRDELDVSNFAEEFTEMDPTYSP------AALPQSSERLFQGYSFVAP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 133/331 (40%)
Rps6ka5NP_001382521.1 Protein Kinases, catalytic domain 47..379 CDD:473864 135/337 (40%)
STKc_MSK1_C 417..726 CDD:271081
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.