DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and Prkaca

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001094392.1 Gene:Prkaca / 25636 RGDID:3389 Length:351 Species:Rattus norvegicus


Alignment Length:309 Identity:127/309 - (41%)
Similarity:190/309 - (61%) Gaps:7/309 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 ETRPGKCSLLD-FNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRIL 460
            ||.....:.|| |:.||.||.||||:|||.:.|.:...||:|:|.|..:::...::.|:.|||||
  Rat    32 ETPSQNTAQLDHFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96

  Fly   461 ALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHT 525
            . |.|.|||..|...|:....|:.|||||.||::...:::..||....|.||||::.|..::||:
  Rat    97 Q-AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160

  Fly   526 HGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDW 590
            ..:||||||.:|:|:||:|:.::.|||..|.  :.|. |.|.||||:|:||||:..:.|..:|||
  Rat   161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR-TWTLCGTPEYLAPEIILSKGYNKAVDW 222

  Fly   591 WALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLG-CTG 654
            ||||||:|||.||.|||.||...::::.|:...|.:|...|.:...:|:..|..:..:|.| ...
  Rat   223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKN 287

  Fly   655 DENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKED 703
            ..|:|:.|.:||..||..:.:|.::.||.||.|.|.|.:||| ::.:|:
  Rat   288 GVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 121/293 (41%)
PrkacaNP_001094392.1 STKc_PKA 42..331 CDD:271111 123/293 (42%)
Blue background indicates that the domain is not in the aligned region.

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