DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and Pkn2

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_038957612.1 Gene:Pkn2 / 207122 RGDID:620146 Length:989 Species:Rattus norvegicus


Alignment Length:700 Identity:228/700 - (32%)
Similarity:325/700 - (46%) Gaps:172/700 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WNEQFVHDVTNVSNINLTVFHDAALPPDDFVANCIISF---EDLMQSETAVQDLWVNLEPQGKIH 126
            |:::|..::.....:.::|:.      .|:.:.|.:.|   ||.:.::.  ..:.:.|||||.:.
  Rat   422 WDQKFTLELDRSRELEISVYW------RDWRSLCAVKFLRLEDFLDNQR--HGMCLYLEPQGTLF 478

  Fly   127 VIIELKNRTDKAKAEAVVEHTVAVNKEFKERAGFNRRRGAMRRRVHQVNGHKFMATFLRQPTFCS 191
            ..:...|        .|:|....:.::.|.   |::::|               .||||.|..  
  Rat   479 AEVTFFN--------PVIERRPKLQRQKKI---FSKQQG---------------KTFLRAPQM-- 515

  Fly   192 HCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVV 256
            :.....||        ::....:....|....|.    :...||.|.:|.|              
  Rat   516 NINIATWG--------RLVRRAIPTVNHSGTFSP----QTPVPATVPVVDA-------------- 554

  Fly   257 HSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCGINTKQMAEILS-------S 314
                                                           .|.::|...|       .
  Rat   555 -----------------------------------------------RTPELAPPASDSTVTKLD 572

  Fly   315 LGISPD--KQQPRRSKYLNQQGGEDNYGASLGADGDGA-------PGQSFRSCALSVDSLATSTT 370
            ..:.|:  ...||.|              |||...|.:       |||.    :.:|..:.....
  Rat   573 FDLEPEAPPAPPRAS--------------SLGEIDDSSELRVLDIPGQG----SETVFDIENDRN 619

  Fly   371 TM----TSGY------NSSSCMSLAVTGSGGVGATGETRPG---KCSLLDFNFIKVLGKGSFGKV 422
            .|    .|.|      :|.||.|        ||...:.|..   :.:|.||....|||:|.||||
  Rat   620 NMRPKSKSEYELNIPDSSRSCWS--------VGELEDKRSQQRFQFNLQDFRCCAVLGRGHFGKV 676

  Fly   423 MLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILAL--AANHPFLTALHSCFQTPDRLFFV 485
            :|||.|.|:|::|||.|||..|:..|:||..|.||||...  :..||||..|.:||||.:.:.||
  Rat   677 LLAEYKHTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSVRHPFLVNLFACFQTKEHVCFV 741

  Fly   486 MEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLAD 550
            |||..|||||..|. ...|...||.||||.|.|.||:||.|.::||||||||:|||.||..|:||
  Rat   742 MEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGFVKIAD 805

  Fly   551 FGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDEL 615
            ||:||||:..|..|:||||||:::|||:|.|..|..:||||.||||:|||:.|:.||..|:|:|:
  Rat   806 FGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV 870

  Fly   616 FDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGC-TGDENEIRKHPFFAKLDWKELEKRNIK 679
            ||||::|:|.||.:||.||:||::..|.:|||:|||. ..|..:::|||||...||..|..:.:|
  Rat   871 FDSIVNDEVRYPRFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVK 935

  Fly   680 PPFRPKMKNPRDANNFDAEFTKEDPVLTPIGN-EVVRCINQDEFAGFSFV 728
            |||.|.::...|.:|||.|||.|.|:|||... .::....|:.|..|.:|
  Rat   936 PPFVPTIRGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYV 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981 13/71 (18%)
C1_1 177..228 CDD:278556 9/50 (18%)
C1_1 252..304 CDD:278556 0/51 (0%)
STKc_nPKC_epsilon 412..729 CDD:270743 166/320 (52%)
Pkn2XP_038957612.1 HR1_PKN_1 48..113 CDD:212012
HR1_PKN2_2 134..207 CDD:212021
HR1_PKN2_3 215..288 CDD:212025
C2_PKN-like 395..478 CDD:176069 13/63 (21%)
STKc_PKN 662..987 CDD:270741 167/324 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0694
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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