DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and R12G8.1

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_507486.1 Gene:R12G8.1 / 187844 WormBaseID:WBGene00011254 Length:164 Species:Caenorhabditis elegans


Alignment Length:149 Identity:69/149 - (46%)
Similarity:88/149 - (59%) Gaps:22/149 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC---PGMRD 231
            ::|:::||||.|..|.||||||.|.:||:|:|||||:|..|..||||:||..:.::|   |..|.
 Worm    20 KIHEISGHKFKAVGLAQPTFCSFCSKFIYGVGKQGYKCLGCETVVHKRCHALITARCTFGPSSRA 84

  Fly   232 EQPAKV------------EMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCET 284
            ..||:.            |..|:.       .|.|..|.:.|.||||||||:||||.|||:||..
 Worm    85 PVPAETTNLKTRRSRSASEEPPSN-------THHFNKHFFTRPTFCDHCGSMLYGLTKQGVQCTD 142

  Fly   285 CGMNVHKRCQKNVANTCGI 303
            |..|||.|||:.|...|||
 Worm   143 CHANVHFRCQEKVLRNCGI 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 32/61 (52%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 32/54 (59%)
STKc_nPKC_epsilon 412..729 CDD:270743
R12G8.1NP_507486.1 C1_cPKC_nPKC_rpt1 26..77 CDD:410342 29/50 (58%)
C1 110..161 CDD:412127 30/50 (60%)
Blue background indicates that the domain is not in the aligned region.

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