DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and pkn-1

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001360642.1 Gene:pkn-1 / 181244 WormBaseID:WBGene00009793 Length:1137 Species:Caenorhabditis elegans


Alignment Length:745 Identity:224/745 - (30%)
Similarity:344/745 - (46%) Gaps:140/745 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKLQIKVCEASGLRPTDFQKRHNLTFGKLADEQLIDPYVSIDVDESHFDRATTRPKTFDPVWNEQ 68
            |.:.:...:|||       |:.....|..:.|::   :..:.:| :.|..||...|..|..|:::
 Worm   505 GFISVYGMDASG-------KKKKSARGPNSSEEV---FCVLRID-NRFIGATELRKIVDRNWDQK 558

  Fly    69 FVHDVTNVSNINLTVFHDAALPPDD-----FVANCIISFEDLMQSETAVQDLWVNLEPQGKIHVI 128
            |..|:.....:.:.:|:.     ||     |.|   :...:|:::.:.| .:.|.:||||.|.|.
 Worm   559 FDVDLDRSRELQIELFYH-----DDRSMCGFAA---VKLSNLIETSSKV-GIIVPVEPQGNIFVQ 614

  Fly   129 IELKN----RTDKAKAEAVVEHTVAVNKEFKERAG---FNRRRGAMRRRVHQVNGHKFMA--TFL 184
            .:..|    |..|.:.:..:......|...:::.|   |:|   .::.|.::.: .||.|  .|.
 Worm   615 FKYMNPVVSRKPKLERQRRLFRVKESNDGARQKLGVFAFSR---LIKNRGNEPS-EKFAAFTGFT 675

  Fly   185 RQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKCPGMRDEQPAKVEMVPAGQRFNVN 249
            ..|:..|.                      |:          ||.....|:....:.:       
 Worm   676 PMPSSSSQ----------------------HQ----------PGTSSSGPSTSSSIAS------- 701

  Fly   250 LPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCGINTKQMAEILSS 314
                         |......:.|:..:...|.......:..||..:..|....:.....|..|::
 Worm   702 -------------TPTPSTSNSLFDKVSNHLPSFNPRKSAKKREAREAAAVAPMTAAVAAVNLNA 753

  Fly   315 LGISPDKQQPRRSKYLNQQGGEDNYGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSS 379
            ...|...|...:.:.|    ..|.:...........|..:.|    .:|..|:            
 Worm   754 PSTSNSMQPSTQERNL----VVDEFPTDRSGPSQAPPVPAVR----HIDFFAS------------ 798

  Fly   380 SCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAI 444
                     |.|...|.|         .|..|.|||:|.||||:|::...|...||:|||||..|
 Worm   799 ---------SDGAPLTVE---------QFRLISVLGRGHFGKVILSQHNPTSNYYALKVLKKGDI 845

  Fly   445 IQDDDVDCTMTEKRILALA--ANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEAS 507
            :..|:|:..|.||||..::  |.||||..|:.||||.:.:||.|||..|||||..|.. ..|:..
 Worm   846 LGRDEVESLMVEKRIFEVSSRARHPFLVNLNGCFQTNEHVFFCMEYSMGGDLMRHIHD-DVFDEV 909

  Fly   508 RAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPD 572
            |..||||.|.|.|.|||.|.:||||:||||:|||:||:.|:||||:|||.:.....|:||||||:
 Worm   910 RGCFYAACVVLGLDFLHKHNIIYRDIKLDNLLLDREGYVKIADFGLCKENMGPFDKTSTFCGTPE 974

  Fly   573 YIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSI 637
            ::|||:|.:..|..::|||.||||::||:.|:|||..|:|:|:||||:.:||.||.:||.|:::|
 Worm   975 FLAPEVLSDSSYTRAIDWWGLGVLIFEMLVGEPPFSGDDEEEIFDSIISEDVRYPRYLSVESIAI 1039

  Fly   638 LKGFLTKNPEQRLGC-TGDENEIRKHPFFAKL--DWKELEKRNIKPPFRPKMKNPRDANNFDAEF 699
            ::..|.|.||:|||. ..|..:|:...||..:  :|.:|..|.|:|||:|:::||.|.:|||.||
 Worm  1040 MRRLLRKVPEKRLGYGERDAEDIKIQRFFRHISWEWDKLLNREIRPPFQPQIRNPEDVSNFDLEF 1104

  Fly   700 TKEDPVLT------PIGNEVVRCINQDEFA 723
            |:|....:      ||.....|..|..:|:
 Worm  1105 TQEKARFSAASSTRPITEADQRLFNNFDFS 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981 31/138 (22%)
C1_1 177..228 CDD:278556 7/52 (13%)
C1_1 252..304 CDD:278556 6/51 (12%)
STKc_nPKC_epsilon 412..729 CDD:270743 154/323 (48%)
pkn-1NP_001360642.1 HR1_PKN_1 188..253 CDD:212012
HR1_PKN_2 273..339 CDD:212013
HR1 344..410 CDD:381797
C2 527..>589 CDD:387358 15/73 (21%)
STKc_PKN 809..1134 CDD:270741 155/325 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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