DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and pkn-1

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001360642.1 Gene:pkn-1 / 181244 WormBaseID:WBGene00009793 Length:1137 Species:Caenorhabditis elegans


Alignment Length:745 Identity:224/745 - (30%)
Similarity:344/745 - (46%) Gaps:140/745 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKLQIKVCEASGLRPTDFQKRHNLTFGKLADEQLIDPYVSIDVDESHFDRATTRPKTFDPVWNEQ 68
            |.:.:...:|||       |:.....|..:.|::   :..:.:| :.|..||...|..|..|:::
 Worm   505 GFISVYGMDASG-------KKKKSARGPNSSEEV---FCVLRID-NRFIGATELRKIVDRNWDQK 558

  Fly    69 FVHDVTNVSNINLTVFHDAALPPDD-----FVANCIISFEDLMQSETAVQDLWVNLEPQGKIHVI 128
            |..|:.....:.:.:|:.     ||     |.|   :...:|:::.:.| .:.|.:||||.|.|.
 Worm   559 FDVDLDRSRELQIELFYH-----DDRSMCGFAA---VKLSNLIETSSKV-GIIVPVEPQGNIFVQ 614

  Fly   129 IELKN----RTDKAKAEAVVEHTVAVNKEFKERAG---FNRRRGAMRRRVHQVNGHKFMA--TFL 184
            .:..|    |..|.:.:..:......|...:::.|   |:|   .::.|.::.: .||.|  .|.
 Worm   615 FKYMNPVVSRKPKLERQRRLFRVKESNDGARQKLGVFAFSR---LIKNRGNEPS-EKFAAFTGFT 675

  Fly   185 RQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKCPGMRDEQPAKVEMVPAGQRFNVN 249
            ..|:..|.                      |:          ||.....|:....:.:       
 Worm   676 PMPSSSSQ----------------------HQ----------PGTSSSGPSTSSSIAS------- 701

  Fly   250 LPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCGINTKQMAEILSS 314
                         |......:.|:..:...|.......:..||..:..|....:.....|..|::
 Worm   702 -------------TPTPSTSNSLFDKVSNHLPSFNPRKSAKKREAREAAAVAPMTAAVAAVNLNA 753

  Fly   315 LGISPDKQQPRRSKYLNQQGGEDNYGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSS 379
            ...|...|...:.:.|    ..|.:...........|..:.|    .:|..|:            
 Worm   754 PSTSNSMQPSTQERNL----VVDEFPTDRSGPSQAPPVPAVR----HIDFFAS------------ 798

  Fly   380 SCMSLAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAI 444
                     |.|...|.|         .|..|.|||:|.||||:|::...|...||:|||||..|
 Worm   799 ---------SDGAPLTVE---------QFRLISVLGRGHFGKVILSQHNPTSNYYALKVLKKGDI 845

  Fly   445 IQDDDVDCTMTEKRILALA--ANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEAS 507
            :..|:|:..|.||||..::  |.||||..|:.||||.:.:||.|||..|||||..|.. ..|:..
 Worm   846 LGRDEVESLMVEKRIFEVSSRARHPFLVNLNGCFQTNEHVFFCMEYSMGGDLMRHIHD-DVFDEV 909

  Fly   508 RAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPD 572
            |..||||.|.|.|.|||.|.:||||:||||:|||:||:.|:||||:|||.:.....|:||||||:
 Worm   910 RGCFYAACVVLGLDFLHKHNIIYRDIKLDNLLLDREGYVKIADFGLCKENMGPFDKTSTFCGTPE 974

  Fly   573 YIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSI 637
            ::|||:|.:..|..::|||.||||::||:.|:|||..|:|:|:||||:.:||.||.:||.|:::|
 Worm   975 FLAPEVLSDSSYTRAIDWWGLGVLIFEMLVGEPPFSGDDEEEIFDSIISEDVRYPRYLSVESIAI 1039

  Fly   638 LKGFLTKNPEQRLGC-TGDENEIRKHPFFAKL--DWKELEKRNIKPPFRPKMKNPRDANNFDAEF 699
            ::..|.|.||:|||. ..|..:|:...||..:  :|.:|..|.|:|||:|:::||.|.:|||.||
 Worm  1040 MRRLLRKVPEKRLGYGERDAEDIKIQRFFRHISWEWDKLLNREIRPPFQPQIRNPEDVSNFDLEF 1104

  Fly   700 TKEDPVLT------PIGNEVVRCINQDEFA 723
            |:|....:      ||.....|..|..:|:
 Worm  1105 TQEKARFSAASSTRPITEADQRLFNNFDFS 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981 31/138 (22%)
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 9/60 (15%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 6/53 (11%)
STKc_nPKC_epsilon 412..729 CDD:270743 154/323 (48%)
pkn-1NP_001360642.1 HR1_PKN_1 188..253 CDD:212012
HR1_PKN_2 273..339 CDD:212013
HR1 344..410 CDD:469609
C2 527..>589 CDD:472691 15/73 (21%)
STKc_PKN 809..1134 CDD:270741 155/325 (48%)
Blue background indicates that the domain is not in the aligned region.

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