DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and pkc-2

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001359883.1 Gene:pkc-2 / 181166 WormBaseID:WBGene00004033 Length:753 Species:Caenorhabditis elegans


Alignment Length:699 Identity:308/699 - (44%)
Similarity:406/699 - (58%) Gaps:128/699 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 AEAVVEHTVAVNK---EFKERAGFNR--RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIW 198
            ::.::|..:|:.|   .|.:|.....  ||||:|:: ||::..|||:|.|.:||||||||::|:|
 Worm    67 SDPMLESNLALRKLSEAFAQRIEGKAFVRRGALRQKNVHEIKSHKFIARFFKQPTFCSHCKDFLW 131

  Fly   199 GIGKQGYQCQVCTLVVHKKCHLSVVSKCPGMRDEQPAKVEMVPAGQRFNVNLP---HRFVVHSYK 260
            ||.|||:|||||||||||:||..|...|||             |.:..:.:.|   |::.|.:|.
 Worm   132 GITKQGFQCQVCTLVVHKRCHEFVNFACPG-------------ADKGVDTDDPRQQHKWKVQTYS 183

  Fly   261 RFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCGI-NTKQMA--------------- 309
            ..||||||||||||::.||::|::|..|||.||.|||.|.||. ||::..               
 Worm   184 SPTFCDHCGSLLYGILHQGMKCQSCDTNVHHRCVKNVPNMCGTDNTEKRGRLRIEAHIENDQLTI 248

  Fly   310 EILSSLGISP-----------------------DKQQPRRSK-YLNQQGGEDNYGASLGADGDGA 350
            :||.:..:.|                       .||:.:..: .||.|..| .:...|      .
 Worm   249 KILEAKNLIPMDPNGLSDPYVKCKLIPEDSGCKSKQKTKTLRATLNPQWNE-TFTYKL------L 306

  Fly   351 PGQSFRSCALSV---DSLATSTTTMTSGYNSSSCMSLAVTG--------SG---GVGATGE---- 397
            ||...|..::.|   |..:.:....:..:..|..|..|.:|        .|   .:..|.|    
 Worm   307 PGDKDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYDED 371

  Fly   398 -------------TRPGKCS------------------------LLDFNFIKVLGKGSFGKVMLA 425
                         ||....|                        ..||||:.||||||||||:|.
 Worm   372 MEKVRKKMNENFITRDNSSSKPKDPAAPRASTLPLGSSNHNVIKASDFNFLTVLGKGSFGKVLLG 436

  Fly   426 EKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVN 490
            |:|.|.|::||||||||.|||||||:|||||||:|||.....||.||||||||.|||:||||:||
 Worm   437 EQKTTKELFAIKVLKKDVIIQDDDVECTMTEKRVLALPEKPSFLVALHSCFQTMDRLYFVMEFVN 501

  Fly   491 GGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCK 555
            |||||:|||:..:|:...|.|||||:.:.|.|||:.|:|||||||||::|:::||.|:.||||||
 Worm   502 GGDLMYQIQQVGKFKEPVAVFYAAEIAVGLFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCK 566

  Fly   556 EGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIM 620
            |.|.....|.|||||||||||||:..|.||.||||||.|||::||:||||||:.::|||||.:|.
 Worm   567 ENIFGDATTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLFEMLAGQPPFDGEDEDELFTAIT 631

  Fly   621 HDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDE----NEIRKHPFFAKLDWKELEKRNIKPP 681
            ..:|.||..||:||||:.|..|.|||.:|||||||:    .:|::||||.::||.::|.|.|:||
 Worm   632 EHNVSYPKSLSKEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQPP 696

  Fly   682 FRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNP 730
            |:||:|..|...|||..|.|....:||...||:..:..|||:.||||||
 Worm   697 FKPKLKTDRSTENFDHSFLKLPTKMTPPDWEVLENLKGDEFSNFSFVNP 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 35/50 (70%)
C1_1 252..304 CDD:278556 30/52 (58%)
STKc_nPKC_epsilon 412..729 CDD:270743 193/320 (60%)
pkc-2NP_001359883.1 C1_1 110..160 CDD:365894 34/49 (69%)
C1_1 175..225 CDD:365894 28/49 (57%)
C2_PKC_alpha_gamma 232..362 CDD:175992 20/136 (15%)
STKc_cPKC 422..744 CDD:270739 193/321 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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