DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and rskn-1

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001122504.1 Gene:rskn-1 / 172647 WormBaseID:WBGene00011352 Length:804 Species:Caenorhabditis elegans


Alignment Length:473 Identity:163/473 - (34%)
Similarity:238/473 - (50%) Gaps:85/473 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 QCETCGMNVHKR-----CQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYG 340
            ||:...|:|..|     |..:..||          ..||:.|.    ||                
 Worm    26 QCKDHRMDVSMRSDPTDCSSDTTNT----------FHSSIHII----QP---------------- 60

  Fly   341 ASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSL 405
                     .|...||......||.:.:...:                 |.|...||    |...
 Worm    61 ---------PPNNGFRLMNWKTDSSSETEIDI-----------------GDVRKCGE----KADP 95

  Fly   406 LDFNFIKVLGKGSFGKVMLAEK-KGTD--EIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHP 467
            ..|..:||||:||||||.|..| :|.|  .:||:||||| |.::..|...|..|:.||| ..:||
 Worm    96 RQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKK-ATLKVRDRQRTKLERNILA-HISHP 158

  Fly   468 FLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRD 532
            |:..||..|||..:|:.:::::.||||..::.|...|......||.||:||||:.||:.|::|||
 Worm   159 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLALEHLHSLGIVYRD 223

  Fly   533 LKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLM 597
            ||.:|||||.:||.|:.|||:.||.|.:...|.:||||.:|:|||::..:.:..:.|:|:|||||
 Worm   224 LKPENILLDADGHIKVTDFGLSKEAIDSEKKTYSFCGTVEYMAPEVINRRGHSMAADFWSLGVLM 288

  Fly   598 YEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGD-ENEIRK 661
            :||:.|..||:..:.::....|:...:..|.:|::||.|:|:....:|.:.|||...| ..||::
 Worm   289 FEMLTGHLPFQGRDRNDTMTQILKAKLSMPHFLTQEAQSLLRALFKRNSQNRLGAGPDGVEEIKR 353

  Fly   662 HPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPI------GNEVVRCINQD 720
            |.||||:|:.:|..:.|.|||:|.:......:.||.||||..|..:|.      |:|:       
 Worm   354 HAFFAKIDFVKLLNKEIDPPFKPALSTVDSTSYFDPEFTKRTPKDSPALPASANGHEI------- 411

  Fly   721 EFAGFSFVNPKFGPERKV 738
             |.|||||:.....|||:
 Worm   412 -FRGFSFVSNAVMEERKL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 8/27 (30%)
STKc_nPKC_epsilon 412..729 CDD:270743 135/326 (41%)
rskn-1NP_001122504.1 STKc_RSK_N 102..418 CDD:270734 134/325 (41%)
STKc_RSK_C 447..744 CDD:270993
Blue background indicates that the domain is not in the aligned region.

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