DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and rskn-2

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001348666.1 Gene:rskn-2 / 172581 WormBaseID:WBGene00008311 Length:773 Species:Caenorhabditis elegans


Alignment Length:342 Identity:131/342 - (38%)
Similarity:196/342 - (57%) Gaps:19/342 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 KCSLLDFNFIKVLGKGSFGKVMLAEKKGTDE---IYAIKVLKKDAII-QDDDVDCTMTEKRILAL 462
            |.|:.:|..::|||||::|||.|..|.|..:   |||:|||:|..:: :...::.||.|:::|..
 Worm    11 KVSMENFALLRVLGKGAYGKVFLVRKVGGKDHNTIYAMKVLRKTRVLTKQKTLEHTMAERQVLER 75

  Fly   463 AANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHG 527
            ....|||..|...|||..:|..|||||.||:|...:.....|:...|.|..||:.:|:..||...
 Worm    76 LRGTPFLVNLFYAFQTDTKLHIVMEYVRGGELFTHLCSRGHFDLEAARFVIAELVVAIDSLHQRK 140

  Fly   528 VIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGML--TTTFCGTPDYIAPEILKEQEYGAS--V 588
            ||||||||:|||||:|||.||.|||:.|. .:.|.|  ..::|||.:|::||::...|.|.|  |
 Worm   141 VIYRDLKLENILLDEEGHVKLTDFGLSKL-FLPGELDRANSYCGTIEYMSPEVINRPEGGYSDVV 204

  Fly   589 DWWALGVLMYEMMAGQPPFEAD----NEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQR 649
            |||:|||:.:|::.|..||..|    :..::...||...|.:|..:..:|...:...|.|..|:|
 Worm   205 DWWSLGVISFELLTGCSPFTVDGAQNSSKDIAKRIMTKKVPFPKTMDVDARDFIGQLLEKKLEKR 269

  Fly   650 LGCTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVV 714
            ||..| .:||:.|.|.:.:||....||.:||...|::.:..|...|.||||.:.|:.:|..:.  
 Worm   270 LGYNG-VDEIKNHKFMSSIDWDAAVKRTLKPVIVPRIGHDLDTQFFSAEFTSQPPLYSPAESP-- 331

  Fly   715 RCINQDE-FAGFSFVNP 730
              :|.:. |.|:|:|:|
 Worm   332 --LNANTLFRGYSYVSP 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 126/329 (38%)
rskn-2NP_001348666.1 Protein Kinases, catalytic domain 22..287 CDD:473864 107/266 (40%)
S_TK_X 285..344 CDD:214529 19/62 (31%)
STKc_MSK_C 374..694 CDD:270994
Blue background indicates that the domain is not in the aligned region.

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