DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and Prkcd

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_579841.2 Gene:Prkcd / 170538 RGDID:67383 Length:673 Species:Rattus norvegicus


Alignment Length:715 Identity:302/715 - (42%)
Similarity:420/715 - (58%) Gaps:80/715 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ADEQLIDPYVSIDVDES-HFDRATT---RPKTFDPVWNEQFVHDVTNVSNINLTVFHDAALPPDD 93
            |::....|:.::.:.|: ..||..|   :..|..|.|...|...:.....|.:.:...|..|..:
  Rat    19 AEDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAEDPMSE 83

  Fly    94 FVANCIISFEDLMQSETAVQDLWVNLEPQGKIHVIIE--LKNRTDKAKAEAVVEHTVAVNKEFKE 156
            ......: ..:..:......:.|::|:||.|:.:.::  |::...|....:            :|
  Rat    84 VTVGVSV-LAERCKKNNGKAEFWLDLQPQAKVLMCVQYFLEDGDCKQSMRS------------EE 135

  Fly   157 RAGF--NRRRGAMRR-RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKC 218
            .|.|  ..||||::: ::|.:..|:|:|||..||||||.|:||:||:.||||:|:.|...:||||
  Rat   136 EAMFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKC 200

  Fly   219 HLSVVSKCPG----MRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQG 279
            ...::.:|.|    .||....|       :|||:::||||.|::|...||||||||||:||:|||
  Rat   201 IDKIIGRCTGTATNSRDTIFQK-------ERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQG 258

  Fly   280 LQCETCGMNVHKRCQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLG 344
            |:||.||||||.:|::.|||.||||.|.:||.|:.:    .::..|:.:.....|....:.....
  Rat   259 LKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQV----TQKASRKPETPETVGIYQGFEKKTA 319

  Fly   345 ADGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPG--KCSLLD 407
            ..|:..|..:                                      |..|:...|  :|.|.:
  Rat   320 VSGNDIPDNN--------------------------------------GTYGKIWEGSNRCRLEN 346

  Fly   408 FNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTAL 472
            |.|.|||||||||||:|||.||.:..:|||.||||.::.||||:|||.|||:||||..:||||.|
  Rat   347 FTFQKVLGKGSFGKVLLAELKGKERYFAIKYLKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL 411

  Fly   473 HSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDN 537
            ...|||.|.||||||::|||||||.||...|||..||.|||||:...|||||..|:|||||||||
  Rat   412 ICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHGKGIIYRDLKLDN 476

  Fly   538 ILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMA 602
            ::||::||.|:||||||||.|......:||||||||||||||:..:|..|||||:.|||:|||:.
  Rat   477 VMLDKDGHIKIADFGMCKENIFGENRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLI 541

  Fly   603 GQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDENEIRKHPFFAK 667
            ||.||..|:|||||:||..|...||.|:::|:..|::....::|.:|||.||:   ||.||||..
  Rat   542 GQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPAKRLGVTGN---IRLHPFFKT 603

  Fly   668 LDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNPKF 732
            ::|..||||.::|||:||:|:|.|.:|||.||..|.|.|:.....::..::|..|.||||||||:
  Rat   604 INWNLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQTAFKGFSFVNPKY 668

  Fly   733  732
              Rat   669  668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981 19/106 (18%)
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 29/62 (47%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 36/53 (68%)
STKc_nPKC_epsilon 412..729 CDD:270743 183/316 (58%)
PrkcdNP_579841.2 C1_nPKC_theta-like_rpt1 152..212 CDD:410384 29/59 (49%)
C1_nPKC_theta-like_rpt2 231..280 CDD:410387 33/48 (69%)
Protein Kinases, catalytic domain 351..666 CDD:473864 184/317 (58%)

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