DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and Rskr

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_006247013.2 Gene:Rskr / 120093092 RGDID:1596488 Length:404 Species:Rattus norvegicus


Alignment Length:300 Identity:94/300 - (31%)
Similarity:147/300 - (49%) Gaps:37/300 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 IKVLG---KGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDV-DCTMTEKRILALAANHPFLTA 471
            :|:||   |||||.|:.......:.::|:||:.|..::|.|.: .|  .|:..:....||||:.:
  Rat    98 LKILGLVAKGSFGTVLKVLDCAQNAVFAVKVVPKVKVLQRDTLRQC--KEEVSIQRQINHPFVHS 160

  Fly   472 LHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLD 536
            |...:|....||.:..|.: .||.........|.......:|||:.|.|.:||..|:|:||:|::
  Rat   161 LGDSWQGKRHLFIMCSYCS-MDLYSLWSTVGCFPEDSVRLFAAELVLVLCYLHDLGIIHRDVKME 224

  Fly   537 NILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMM 601
            |||||:.||.|:.|||:.:. :..|....|.|||..|:|||:|....|..:.|||:||||::.:.
  Rat   225 NILLDERGHLKVTDFGLSRR-LSQGARAYTICGTLQYMAPEVLSGGPYNHTADWWSLGVLLFSLA 288

  Fly   602 AGQPPFEADNED-ELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDENEIRKHPFF 665
            ||:.|..|:.:. .:..|:.|.....|..:::|...:|...|.:||..||...   :..:.||||
  Rat   289 AGKFPVAAERDHLTMLASVTHCGSEIPASINQELSLLLHELLCQNPLYRLRYL---HHFQAHPFF 350

  Fly   666 AKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPV 705
                      |.:.               ||.|..::.||
  Rat   351 ----------RGVA---------------FDPELLQKQPV 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 93/298 (31%)
RskrXP_006247013.2 Protein Kinases, catalytic domain 106..350 CDD:473864 83/250 (33%)
Blue background indicates that the domain is not in the aligned region.

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