DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcg

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_004916388.1 Gene:prkcg / 100496779 XenbaseID:XB-GENE-876551 Length:683 Species:Xenopus tropicalis


Alignment Length:677 Identity:311/677 - (45%)
Similarity:394/677 - (58%) Gaps:135/677 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC 226
            |:||:|:: ||:|..|||.|.|.:||||||||.:|||||||||:|||||:.||||:||..|..:|
 Frog    21 RKGALRQKLVHEVKSHKFTARFFKQPTFCSHCTDFIWGIGKQGFQCQVCSFVVHKRCHEFVTFEC 85

  Fly   227 PGMRDEQPAKVEMVPAGQRFNVNLP---HRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMN 288
            ||             ||:..:.:.|   |:|.||||...||||||||||||::.||::|..|.||
 Frog    86 PG-------------AGKGPHSDDPRSRHKFKVHSYSSPTFCDHCGSLLYGMVHQGMKCACCEMN 137

  Fly   289 VHKRCQKNVANTCGINTKQ----------------------------------MAEILSSLGISP 319
            |||||.:||.:.||::..:                                  :::....|.:.|
 Frog   138 VHKRCVQNVPSLCGVDHTERRGRLHIRVEAINDEEFQVTVGEARNLIPMDPNGLSDPYVKLKLIP 202

  Fly   320 D-----KQQPRR----------------------------------------------------- 326
            |     ||:.|.                                                     
 Frog   203 DPKNMTKQKTRTVKSTLNPVWNEAFIFSLKSGDEDRRLSVEVWDWDRTSRNDFMGSMSFGVSEIM 267

  Fly   327 -------SKYLNQQGGEDNYGASLGADGDG-APGQSFRSCALSVDSLATSTTTMTSGYNSSSCMS 383
                   .|.|||:.|| .|...:..|.|. ...|.|.:|...::        :..........|
 Frog   268 KNAVDGWYKLLNQEEGE-YYNVPVADDEDDFGLRQKFEACNFPLE--------LYEKVRRGPVPS 323

  Fly   384 LAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDD 448
            .:.|.|..|...|.:|   ..:.||||:.||||||||||||||::|:||:||||:||||.|||:|
 Frog   324 PSPTDSKRVNFFGTSR---FHISDFNFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIIQED 385

  Fly   449 DVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYA 513
            ||:|||.|||:|||:....|||.|||.|||.|||:||||||||||||:.||:..:|:...|.|||
 Frog   386 DVECTMVEKRVLALSDRPHFLTQLHSTFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAMFYA 450

  Fly   514 AEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEI 578
            ||:.:.|.|||..|:|||||||||::||.|||.|:.|||||||.|.:|..|.|||||||||||||
 Frog   451 AEIAIGLFFLHNKGIIYRDLKLDNVMLDSEGHIKITDFGMCKENIYSGATTRTFCGTPDYIAPEI 515

  Fly   579 LKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLT 643
            :..|.||.|||||:.|||:|||:||||||:.::|||||.|||...|.||..||||||||.||.||
 Frog   516 IAYQPYGKSVDWWSYGVLLYEMLAGQPPFDGEDEDELFQSIMEQTVSYPKSLSREAVSICKGLLT 580

  Fly   644 KNPEQRLGCTGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNP--RDANNFDAEFTKEDPV 705
            |:|.:|||...| |.:||.|.||..:||:.||:..|:|||:|:   |  :...|||..||:..||
 Frog   581 KHPLKRLGSGSDGERDIRDHAFFRWIDWERLERLEIQPPFKPR---PCGKSGENFDKFFTRAPPV 642

  Fly   706 LTPIGNEVVRCINQDEFAGFSFVNPKF 732
            |||....|:..|:|.|||||:|:||:|
 Frog   643 LTPPDQLVLAGIDQSEFAGFTFINPEF 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 35/50 (70%)
C1_1 252..304 CDD:278556 33/51 (65%)
STKc_nPKC_epsilon 412..729 CDD:270743 200/319 (63%)
prkcgXP_004916388.1 C1_1 36..88 CDD:278556 37/64 (58%)
C1_1 101..153 CDD:278556 33/51 (65%)
C2_PKC_alpha_gamma 158..289 CDD:175992 13/131 (10%)
S_TKc 345..603 CDD:214567 172/257 (67%)
STKc_cPKC 348..666 CDD:270739 200/320 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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