DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and prkcq

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_012813823.2 Gene:prkcq / 100038268 XenbaseID:XB-GENE-487643 Length:699 Species:Xenopus tropicalis


Alignment Length:648 Identity:301/648 - (46%)
Similarity:402/648 - (62%) Gaps:59/648 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SETAVQ---------------DLWVNLEPQGKIHVIIELKNRTDKAKAEAVVEHTVAVNKEFKER 157
            |||.|:               ::|:.|:|||:  :|:..:...:::..:   ||....:..|   
 Frog    81 SETTVELNSLAERCKKNNGKIEIWIELKPQGR--MIVNARYFLEQSDPK---EHFEDDSSHF--- 137

  Fly   158 AGFNRRRGAMRR-RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLS 221
             ..::|||||:: :||||..|:|.|||..||||||.|.||:||:.||||||:.|...:||||...
 Frog   138 -ALHQRRGAMKQAKVHQVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 201

  Fly   222 VVSKCPGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCG 286
            |::||.|......   |.|...:||.:::||||.|::|:..|||:|||:||:||.:|||:|..|.
 Frog   202 VIAKCTGSAVNSK---ETVLHKERFKIDMPHRFKVNNYRSPTFCEHCGTLLWGLARQGLKCAECN 263

  Fly   287 MNVHKRCQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLGADGD--- 348
            ||||.:|...|||.||:|.|.|||.|:.:..:...::.|.|:::.:: |..|.|.:......   
 Frog   264 MNVHHKCAVKVANLCGVNQKLMAEALAMIETTQQDRRQRDSEFIYRE-GPVNVGPTTNTQDQPIV 327

  Fly   349 -----GAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLLDF 408
                 .:.|.|:.|...|: .:..|..........||| .:.||.|                 ||
 Frog   328 LSIKKESQGISWESPIESI-KVQESPPEPELKIEQSSC-QIKVTFS-----------------DF 373

  Fly   409 NFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALH 473
            ...|:|||||||||.|||.|.|::.:||||||||.::.||||:|||.|||:|:||..|||||.|:
 Frog   374 VLHKMLGKGSFGKVFLAELKRTNQFFAIKVLKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 438

  Fly   474 SCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNI 538
            ..|||.:.|||||||:|||||||.||...:|:..||.|||||:...|||||:.||:|||||||||
 Frog   439 CTFQTKEHLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIVCGLQFLHSKGVVYRDLKLDNI 503

  Fly   539 LLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAG 603
            |||.|||.|:||||||||.::....|:||||||||||||||..|:|..|||||:.|||:|||:.|
 Frog   504 LLDMEGHIKIADFGMCKESMLGDAKTSTFCGTPDYIAPEILLGQKYNYSVDWWSFGVLLYEMLIG 568

  Fly   604 QPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDENEIRKHPFFAKL 668
            |.||...:|:|||.||..|:.:||.:||.||..||.....:.||:|||..||   ||:|.||..:
 Frog   569 QSPFHGIDEEELFQSIRMDNPMYPRFLSMEAKDILIMLFVREPERRLGVKGD---IRQHCFFQHI 630

  Fly   669 DWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNPK 731
            ||..||.|.|:|||:||:|:..|.:|||.||..|.|.|:.....::..::|:.|..|||||||
 Frog   631 DWGRLENREIEPPFKPKVKSADDWSNFDKEFLNEKPRLSSSERTLINSMDQNMFNNFSFVNPK 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981 10/40 (25%)
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 35/58 (60%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 31/53 (58%)
STKc_nPKC_epsilon 412..729 CDD:270743 185/316 (59%)
prkcqXP_012813823.2 C1_nPKC_theta-like_rpt1 150..210 CDD:410384 35/59 (59%)
C1_nPKC_theta-like_rpt2 229..278 CDD:410387 28/48 (58%)
STKc_nPKC_theta 367..697 CDD:270770 194/347 (56%)

Return to query results.
Submit another query.