DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and prkcb

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001103513.1 Gene:prkcb / 100038043 XenbaseID:XB-GENE-486491 Length:670 Species:Xenopus tropicalis


Alignment Length:680 Identity:316/680 - (46%)
Similarity:402/680 - (59%) Gaps:135/680 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC 226
            |:||:|:: ||:|..|||.|.|.:||||||||.:||||.||||:|||||..||||:||..|...|
 Frog    19 RKGALRQKNVHEVKEHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSC 83

  Fly   227 PGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHK 291
            || .|:.||..:  |..:       |:|.:|:|...||||||||||||||.||::||||.|||||
 Frog    84 PG-ADKGPASDD--PRSK-------HKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCETCMMNVHK 138

  Fly   292 RCQKNVANTCG-----------INTKQMAEILS----------------------SLGISPDKQQ 323
            ||..||.:.||           |..:...|:|:                      .|.:.||.:.
 Frog   139 RCVMNVPSLCGTDHTERRGRIHIKAEIREEVLTVTVGDARNLVPMDPNGLSDPYVKLKLIPDPKS 203

  Fly   324 PRRSK------YLNQQGGED---------------------------------NYGAS----LGA 345
            ..:.|      .||....|.                                 ::|.|    .|.
 Frog   204 ESKQKTKTIKCSLNPTWNESFKFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELLKAGV 268

  Fly   346 DG-------------------DGAPG-----QSFRSCALSVDSLATS---TTTMTSGYNSSSCMS 383
            ||                   :|..|     |.|....:...:.|..   ...|....|:     
 Frog   269 DGWFKLLSQEEGEYFNVPVPPEGEEGNEELRQKFERAKIGPGTKAVEEKVVNPMPKVDNN----- 328

  Fly   384 LAVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDD 448
                         ||| .:..:.||||:|||||||||||:|||:|||||:||||:||||.:||||
 Frog   329 -------------ETR-DRMKVSDFNFLKVLGKGSFGKVILAERKGTDELYAIKILKKDVVIQDD 379

  Fly   449 DVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYA 513
            ||:|||.|||:|||:...||||.|||||||.|||:||||||||||||:|||:..||:...|.|||
 Frog   380 DVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYA 444

  Fly   514 AEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEI 578
            ||:.:.|.|||:.|::||||||||::||.|||.|:||||||||.:.:|:.|.|||||||||||||
 Frog   445 AEIAIGLLFLHSKGIVYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEI 509

  Fly   579 LKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLT 643
            :..|.|..||||||.|:|:|||:|||.|||.::|||||.|||..:|.||..:|:|||:|.||.:|
 Frog   510 IAYQPYAKSVDWWAFGILLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 574

  Fly   644 KNPEQRLGCTGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLT 707
            |:|.:||||..: |.:|:.|.||..:||::||:..|:||::||... |:|.|||..||:..||||
 Frog   575 KHPGKRLGCGPEGERDIKDHAFFRYIDWEKLERNEIQPPYKPKACG-RNAENFDKFFTRHPPVLT 638

  Fly   708 PIGNEVVRCINQDEFAGFSFVNPKFGPERK 737
            |..:||:|.|:|.||.|||:||..|..|.:
 Frog   639 PPDHEVIRNIDQSEFEGFSYVNSDFAKEEE 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556 34/50 (68%)
C1_1 252..304 CDD:278556 35/62 (56%)
STKc_nPKC_epsilon 412..729 CDD:270743 201/317 (63%)
prkcbNP_001103513.1 C1_1 34..86 CDD:278556 36/52 (69%)
C1_1 99..149 CDD:278556 33/49 (67%)
C2_PKC_alpha_gamma 156..286 CDD:175992 15/129 (12%)
STKc_cPKC_beta 338..660 CDD:270767 205/322 (64%)
S_TKc 339..597 CDD:214567 171/257 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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