DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slu7 and SMP1

DIOPT Version :9

Sequence 1:NP_651659.2 Gene:Slu7 / 43427 FlyBaseID:FBgn0039626 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_564859.2 Gene:SMP1 / 842877 AraportID:AT1G65660 Length:535 Species:Arabidopsis thaliana


Alignment Length:581 Identity:240/581 - (41%)
Similarity:318/581 - (54%) Gaps:89/581 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KSREDWRKAKELEEARKAGTAPAAVDEEGRDINPHIPQYISNAPWYYGSAGPTLKHQRPQHED-- 91
            |||||.||..|||||||||.|||.|||:|::||||||||:|:||||..|..|:|||||....|  
plant     9 KSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPN 73

  Fly    92 ------EQGQLDKRAPKGLNTARII--TKFRKGACENCGAVTHKRKDCLERPRKVQAKYAESIVV 148
                  ::|            |:|.  .|:|||||:||||:||..|.|::||||:.|||....:.
plant    74 YTKSWYDRG------------AKIFQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKYTNMNIA 126

  Fly   149 HDEHLVNEAAVNYDEKRDRWSSYDPANHREIIEEYEKVEEA-KRQLKAEKLK---------NDPD 203
            .||. :....::||.|||||:.|||:.:..:|:.||..|:| |:.||.::||         ...|
plant   127 PDEK-IESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKKYLKEQQLKKLEEKNNNEKGDD 190

  Fly   204 AEISDEEGNEDKYVDE--VD----MPGTKVDSKQRI-------TVRNLRIREDTAKYLRNLDPNS 255
            |....||..:|..|||  ||    |...||:.:.|.       |||||||||||||||.|||.||
plant   191 ANSDGEEDEDDLRVDEAKVDESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNS 255

  Fly   256 AYYDPKTRSMRDNPNPAVPEEEAEFAGENFVRFSGDTTAQATAQLFAWEAHGKGVDVHLLAEPTK 320
            |:|||||||||::|.|.....:..:.|:|..|.||.........:.:|||..||.|:|:.|.|::
plant   256 AHYDPKTRSMREDPLPDADPNDKFYLGDNQYRNSGQALEFKQLNIHSWEAFDKGQDMHMQAAPSQ 320

  Fly   321 LELLQKEYEQKKEQFKSSTKTHIVEKYGGEEHLQVPPKSLLLAQTEEYIEYSRSGKVIKGVEKPK 385
            .|||.|.::..||:.||.||..|::|||........|..|||.|:|..:||.|:|::|||.|...
plant   321 AELLYKSFQVAKEKLKSQTKDTIMDKYGNAATEDEIPMELLLGQSERQVEYDRAGRIIKGQEVIL 385

  Fly   386 ARSIYEEDVYINNHTTVWGSFWNAGRWGYKCCKSFIKNSYCVGMQEPEGYSEHHSTSSTAAATTE 450
            .:|.|||||:.||||:||||:|...:||||||:..|:||||.|               :|.....
plant   386 PKSKYEEDVHANNHTSVWGSYWKDHQWGYKCCQQIIRNSYCTG---------------SAGIEAA 435

  Fly   451 PAAQSQFKVPEVPPERPTSEVDSASSSEPSSSEEEEVKPEKKKTKKKSKKREKKKKAKEQRKQKG 515
            .||....|               |:.:...::||...|.|:|:.........:..:..|:.....
plant   436 EAALDLMK---------------ANIARKEATEESPKKVEEKRMASWGTDIPEDLELNEEALANA 485

  Fly   516 KNKETKDKDKTKEKDIPEELDDRKRAYNSMY--DVKAPTEDEIEEWKKKRPRAEDPMLQFM 574
            ..||  |..:.:||      |:|||.||..|  ||   |.:|:|.::.||...||||..|:
plant   486 LKKE--DLSRREEK------DERKRKYNVKYNNDV---TPEEMEAYRMKRVHHEDPMKDFL 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slu7NP_651659.2 Slu7 160..405 CDD:371683 120/267 (45%)
SMP1NP_564859.2 Slu7 136..405 CDD:403036 120/268 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 214 1.000 Domainoid score I764
eggNOG 1 0.900 - - E1_KOG2560
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4690
Inparanoid 1 1.050 396 1.000 Inparanoid score I480
OMA 1 1.010 - - QHG54674
OrthoDB 1 1.010 - - D816947at2759
OrthoFinder 1 1.000 - - FOG0003809
OrthoInspector 1 1.000 - - otm3345
orthoMCL 1 0.900 - - OOG6_101940
Panther 1 1.100 - - LDO PTHR12942
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2654
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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