Protein Alignment Cpsf100 and emb2746

DIOPT Version :10

• Sequence 1: NP_651658.1
• Gene: Cpsf100 / 43426
• FlyBaseID: FBgn0027873
• Length: 756
• Species: Drosophila melanogaster
• Sequence 2: NP_201147.2
• Gene: emb2746 / 836461
• AraportID: AT5G63420
• Length: 911
• Species: Arabidopsis thaliana
• Alignment Length: 831
• Identity: 146/831 - (17%)
• Similarity: 259/831 - (31%)
• Gaps: 341/831 - (41%)

  Fly     6 KLHTISGAMDES--------------PPCYILQID---------------DVRILLDCG-----W 36
            :|..:..:|::|              ||..||.|.               |..||:|.|     :
plant    82 RLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDY 146

  Fly    37 DEKF------DANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQ 95
            ||..      |..||:..|   |.::||:::|....|:||||:::..|..|.||:|
plant   147 DEPGIQKIMPDTGFIRRWK---HKIEAVVITHGHEDHIGALPWVIPALDPNTPIFA--------- 199

  Fly    96 MFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGI---------------- 144
                    |.|.|                        :.:..:.|.:||
plant   200 --------SSFTM------------------------ELIKKRLKEHGIFVQSRLKTFSTRRRFM 232

  Fly   145 ----SITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDR--LQRPS-----LL 198
                .|.|:...|.|.......::..:.:|::..|:. ..|..|.|...||  |:..|     |:
plant   233 AGPFEIEPITVTHSIPDCSGLFLRCADGNILHTGDWK-IDEAPLDGKVFDREALEELSKEGVTLM 296

  Fly   199 ITDAYNAQYQQARRRARDEKLMTNILQTVRN-------------------NGNVLIAVDTAGRVL 244
            ::|:.|.   .:..|...||::.:.|  |||                   .|::..|.|..||.|
plant   297 MSDSTNV---LSPGRTISEKVVADAL--VRNVMAAKGRVITTQFASNIHRLGSIKAAADITGRKL 356

  Fly   245 ELAHM-----LDQLWKNKE--------------------------SGLMAYSLALLNNVSY---N 275
            ....|     |:..|::.:                          :|..|...|.||..||   :
plant   357 VFVGMSLRTYLEAAWRDGKAPIDPSSLIKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSH 421

  Fly   276 VIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTR 340
            ..:..|..|...|.|:....|.        :.:::.:.:||:     ||.:::
plant   422 AFKLTKEDIILYSAKVIPGNES--------RVMKMMNRIADI-----GPNIIM------------ 461

  Fly   341 DLFVQWASNANNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKL 405
                     ..|.::.|:                 |....           .||||.|:
plant   462 ---------GKNEMLHTS-----------------GHAYR-----------GELEEVLK------ 483

  Fly   406 NPLIVKPD----VEEESSSESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEK 466
               ||||.    :..|           .:...:|:::.:..|..|:...|:
plant   484 ---IVKPQHFLPIHGE-----------LLFLKEHELLGKSTGIRHTTVIKN-------------- 520

  Fly   467 VKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKE-EPGIGAEQQ---------ANGGIVD 521
                  ||::.:...|........|..:..:|.:.:..: :...|...:         ::.||:.
plant   521 ------GEMLGVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKAFGTSSELCIDERLRISSDGIIV 579

  Fly   522 NDVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVA 586
            ..::::.......:.:..|.:..:...:| :||        :|..|..    ..|.......|..
plant   580 LSMEIMRPGVSENTLKGKIRITTRCMWLD-KGR--------LLDALHK----AAHAALSSCPVTC 631

  Fly   587 --RHCEQNVG------ARVFTPQKGEIIDVTSEIHIYQVRLTE-------------GLVSQLQFQ 630
              .|.|:.|.      .|.::.::.|:|.:.:| :...||..|             |:.:..:..
plant   632 PLSHMERTVSEVLRKIVRKYSGKRPEVIAIATE-NPMAVRADEVSARLSGDPSVGSGVAALRKVV 695

  Fly   631 KGKDAEVAWVDGRLGMRVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEI 681
            :|.|           .|.:|.:||     .|:||.:|    ...||.||.|
plant   696 EGND-----------KRSRAKKAP-----SQEASPKE----VDRTLEDDII 726

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpsf100	NP_651658.1	CPSF2-like_MBL-fold	7..204	CDD:293851	54/263 (21%)
		Beta-Casp	243..369	CDD:214983	22/159 (14%)
		RMMBL	539..600	CDD:462191	12/68 (18%)
		CPSF100_C	617..753	CDD:463836	19/78 (24%)
emb2746	NP_201147.2	RnjA	108..664	CDD:440360	123/720 (17%)
		GT1	819..884	CDD:213402