Protein Alignment Cpsf100 and SNM1

DIOPT Version :10

• Sequence 1: NP_651658.1
• Gene: Cpsf100 / 43426
• FlyBaseID: FBgn0027873
• Length: 756
• Species: Drosophila melanogaster
• Sequence 2: NP_850635.1
• Gene: SNM1 / 822280
• AraportID: AT3G26680
• Length: 484
• Species: Arabidopsis thaliana
• Alignment Length: 260
• Identity: 45/260 - (17%)
• Similarity: 78/260 - (30%)
• Gaps: 111/260 - (42%)

  Fly   278 EFAKSQIEW---------MSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPD 333
            :|.|:..:|         :|..:.|.   .::|.||...:|                   .::||
plant    49 DFYKAGSDWSCLVEDEETVSSSVKKM---KQSNLFQIWGLQ-------------------ENSPD 91

  Fly   334 LESGFTR-DLFVQW--------ASNANNSIILTT-----RTSPGTLAMELVENC-----APGKQI 379
            ......: |||..|        .|.|:||...||     |....:.:.:....|     .||...
plant    92 TTKKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPGTPF 156

  Fly   380 ELDVRRRVDLEG----------------------------AELEEYLRTQGEKLNPLIVKPDVEE 416
            .:|..|...::|                            :.|...|......:||..:.|
plant   157 TVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPSSIHP---- 217

  Fly   417 ESSSESEDDIEMSVITGKHDIVVRPEGRH------------------HSGFFKSNKR---HHVMF 460
                 .|.|:|.::...|..::   |..|                  |:|.|:::|:   |.::|
plant   218 -----LELDVEYTINGIKVTLI---EANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLF 274

  Fly   461  460
            plant   275  274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpsf100	NP_651658.1	CPSF2-like_MBL-fold	7..204	CDD:293851
		Beta-Casp	243..369	CDD:214983	22/113 (19%)
		RMMBL	539..600	CDD:462191
		CPSF100_C	617..753	CDD:463836
SNM1	NP_850635.1	SNM1A-1C-like_MBL-fold	142..290	CDD:293831	23/145 (16%)
		DRMBL	360..467	CDD:429512