DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf100 and AT2G45700

DIOPT Version :10

Sequence 1:NP_651658.1 Gene:Cpsf100 / 43426 FlyBaseID:FBgn0027873 Length:756 Species:Drosophila melanogaster
Sequence 2:NP_182094.1 Gene:AT2G45700 / 819178 AraportID:AT2G45700 Length:723 Species:Arabidopsis thaliana


Alignment Length:328 Identity:65/328 - (19%)
Similarity:123/328 - (37%) Gaps:83/328 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 FEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKE------ 181
            :|::..|...|.|::.    ||.:|..:|.|..|..:........:.:::..||.:.:|      
plant   458 WERLQVLDLGQKVNIS----GIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSEEMSNWLI 518

  Fly   182 -RHLSGCELDRLQRPSLLITDAY-NAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVD--TAGR 242
             .|:|          ||::...| |.||...::.|..: .:...:|....|...|..:.  |.|:
plant   519 GSHIS----------SLILDTTYCNPQYDFPKQEAVIQ-FVVEAIQAEAFNPKTLFLIGSYTIGK 572

  Fly   243 ---VLELAHML-DQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPF 303
               .||:|.:| ::::.|..      .|.||     ..:.|:|..|:|.:.|..::         
plant   573 ERLFLEVARVLREKIYINPA------KLKLL-----ECLGFSKDDIQWFTVKEEES--------- 617

  Fly   304 QFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAME 368
               ||.:.            |...|||       |.|...|  |:...|...|....||......
plant   618 ---HIHVV------------PLWTLAS-------FKRLKHV--ANRYTNRYSLIVAFSPTGWTSG 658

  Fly   369 LVENCAPGKQIELDVRRRVDL------EGAELEEYLRTQGEKLNPLIVKPDVEEESSSESEDDIE 427
            ..:..:||::::.....|.::      ...||:|::    :|::|.::.|.|..:....:...:.
plant   659 KTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFV----QKVSPEVIIPSVNNDGPDSAAAMVS 719

  Fly   428 MSV 430
            :.|
plant   720 LLV 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf100NP_651658.1 CPSF2-like_MBL-fold 7..204 CDD:293851 18/88 (20%)
Beta-Casp 243..369 CDD:214983 27/126 (21%)
RMMBL 539..600 CDD:462191
CPSF100_C 617..753 CDD:463836
AT2G45700NP_182094.1 SAM_1 244..300 CDD:425739
SNM1A-1C-like_MBL-fold 381..534 CDD:293831 18/89 (20%)
DRMBL 605..710 CDD:429512 27/141 (19%)
Blue background indicates that the domain is not in the aligned region.

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