Protein Alignment Cpsf100 and CPSF73-II

DIOPT Version :10

• Sequence 1: NP_651658.1
• Gene: Cpsf100 / 43426
• FlyBaseID: FBgn0027873
• Length: 756
• Species: Drosophila melanogaster
• Sequence 2: NP_178282.2
• Gene: CPSF73-II / 814702
• AraportID: AT2G01730
• Length: 613
• Species: Arabidopsis thaliana
• Alignment Length: 777
• Identity: 145/777 - (18%)
• Similarity: 264/777 - (33%)
• Gaps: 249/777 - (32%)

  Fly    10 ISGAMDE-SPPCYILQIDDVRILLDCGW-----DEKFDANF--IKELKRQVHTLDAVLLSHPDAY 66
            :.||..| ...|.::.|:..:|:.|||.     |.....||  |.:.....:.:..::::|....
plant     7 VLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMD 71

  Fly    67 HLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFN-MGDFDLFSLDDVDTAFEKITQLK 130
            |:|||||.....|.|.|||.:.|...:..:.:.|......: .|:.:||:...:....:|:..:.
plant    72 HVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAID 136

  Fly   131 YNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRP 195
            ..||:.:.:   .:.|....|||:: |.:....|:|:..|||..|:|...:|||...::||||.
plant   137 LKQTIQVDE---DLQIRAYYAGHVL-GAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDRLQL- 196

  Fly   196 SLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESG 260
            .|||:::..|...:..:..|:.:.:..:.:.|...|..||.....||..||..:||..|:.....
plant   197 DLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIK 261

  Fly   261 LMAY---SLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQ-----LCHSLADV 317
            :..|   .|.:..|:.|.::      |.|.|..:.:...  .:|||.||:::     |.|:
plant   262 VPIYFSSGLTIQANMYYKML------ISWTSQNVKEKHN--THNPFDFKNVKDFDRSLIHA---- 314

  Fly   318 YKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAPGKQIELD 382
                .||.|:.|:...|.:||:.::|..||.:..|.:.|                  ||
plant   315 ----PGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVAL------------------PG------ 351

  Fly   383 VRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSSESEDDIEMSVITGKHDIVVRPEGRHHS 447
                                                                             
plant   352 ----------------------------------------------------------------- 351

  Fly   448 GFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAE 512
                                             |.:|...|::.
plant   352 ---------------------------------YSVAGTVGHKL--------------------- 362

  Fly   513 QQANGGIVDNDVQLLEKPTKLISQRKT-IEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIH 576
                         :..|||.:.....| ::|..:|.::.|...:|.:.::.:...|.|:.|:::|
plant   363 -------------MAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVH 414

  Fly   577 GTAEGTQVVARHCEQNVGARVFTPQKGEIIDVTSEIHI----------------------YQVRL 619
            |......::.......:....|.|..||.:...|..:|                      .|:|:
plant   415 GEKPSMMILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFSNSTQLRV 479

  Fly   620 TEGLVSQ--LQFQKGKDAEVAWVD----------------GRLGMRVKAIEAPMDVTVEQDASVQ 666
            |:...:.  |..:|.|.|::...|                ....::||......||.:.:..|.:
plant   480 TDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKGESEDDDVDLIKQLSAK 544

  Fly   667 EGKTLTLETLADDEIPIHNSVLINELKLSDFKQTL-----MRNNINSEFSGGVLWCSNGTLA 723
            ..||::...:.:.|         |.|:::.||.:|     ..:..:|..|..|..|.|.::|
plant   545 ILKTVSGAQIHESE---------NCLQVASFKGSLCLKDKCMHRSSSSSSEAVFLCCNWSIA 597

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpsf100	NP_651658.1	CPSF2-like_MBL-fold	7..204	CDD:293851	55/202 (27%)
		Beta-Casp	243..369	CDD:214983	31/133 (23%)
		RMMBL	539..600	CDD:462191	11/61 (18%)
		CPSF100_C	617..753	CDD:463836	26/130 (20%)
CPSF73-II	NP_178282.2	COG1782	1..444	CDD:441388	116/613 (19%)
		INTS11-like_MBL-fold	5..203	CDD:293849	55/200 (28%)