DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf100 and Dclre1a

DIOPT Version :10

Sequence 1:NP_651658.1 Gene:Cpsf100 / 43426 FlyBaseID:FBgn0027873 Length:756 Species:Drosophila melanogaster
Sequence 2:XP_006527280.1 Gene:Dclre1a / 55947 MGIID:1930042 Length:1047 Species:Mus musculus


Alignment Length:429 Identity:74/429 - (17%)
Similarity:132/429 - (30%) Gaps:171/429 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GKLGLNCPIYATIP-------VFKMGQMFMYDLY-MSHFNMGDFDLFSLDDVDTAFEKITQLKYN 132
            |::...||.|..||       .|:.|::.....| ::||:...:...|.|     |.:       
Mouse   702 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKD-----FTR------- 754

  Fly   133 QTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDI---------------VYATDFNHKKER 182
                           |:....:.|..:.|.::|.|:.|               |...|.|     
Mouse   755 ---------------PVYCSEITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDAN----- 799

  Fly   183 HLSGCELDRLQRPS---LLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVL 244
            |..|..:...|.|:   :|.|..:.|.....|.|....|:.|..|.|                  
Mouse   800 HCPGATMILFQLPNGAVILHTGDFRADPSMERSRLAGRKVHTLFLDT------------------ 846

  Fly   245 ELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFA-KSQIEWMSDKLTKAFEGARNNPFQFKHI 308
                                        :|...|:. .||.|.:...:..|||....||   :.:
Mouse   847 ----------------------------TYCSPEYTFPSQQEVIQFAINTAFEAVTLNP---RAL 880

  Fly   309 QLCH-----------SLADVYKLPAGPKVVLASTPDLESGFTRDLF--VQWASNANNSIILTTRT 360
            .:|.           ::|||    .|.||          |.:::.:  :|..:....|.::||  
Mouse   881 VVCGTYCIGKEKVFLAIADV----LGSKV----------GMSQEKYKTLQCLNIPEVSSLITT-- 929

  Fly   361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIV-KPDVEEESSSESED 424
                      :.|  ...:.|....:::.:|  |:.:|:..|.|.:.::. :|.....|::    
Mouse   930 ----------DMC--DSLVHLLPMMQINFKG--LQSHLKKCGGKYDQILAFRPTGWTHSNN---- 976

  Fly   425 DIEMSVITGKHDIVVRPEGR---------HHSGFFKSNK 454
                  ||...||:.:..|.         .||.:.:..:
Mouse   977 ------ITSTADIIPQTRGNISIYGIPYSEHSSYLEMKR 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf100NP_651658.1 CPSF2-like_MBL-fold 7..204 CDD:293851 29/153 (19%)
Beta-Casp 243..369 CDD:214983 22/139 (16%)
RMMBL 539..600 CDD:462191
CPSF100_C 617..753 CDD:463836
Dclre1aXP_006527280.1 metallo-hydrolase-like_MBL-fold 696..851 CDD:451500 37/226 (16%)
DRMBL 921..1027 CDD:429512 19/115 (17%)
Blue background indicates that the domain is not in the aligned region.

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