DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf100 and INTS9

DIOPT Version :10

Sequence 1:NP_651658.1 Gene:Cpsf100 / 43426 FlyBaseID:FBgn0027873 Length:756 Species:Drosophila melanogaster
Sequence 2:NP_001349967.1 Gene:INTS9 / 55756 HGNCID:25592 Length:676 Species:Homo sapiens


Alignment Length:716 Identity:143/716 - (19%)
Similarity:260/716 - (36%) Gaps:249/716 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFI------------------------ 45
            :||:.:||  ..:.||.:|:.....|:||||.|.....||:                        
Human     1 MKLYCLSG--HPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDGNAF 63

  Fly    46 --KELKR---------------------QVHTLDAVLLSHPDAYH-LGALPYLVGKLGLNCPIYA 86
              ||||.                     .:.|:|.:|:|:   || :.||||:....|....:||
Human    64 LDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISN---YHCMMALPYITEHTGFTGTVYA 125

  Fly    87 TIPVFKMGQMFMYDLY-----------MSHFNMGDFD------------------LFSLDDVDTA 122
            |.|..::|::.|.:|.           .|.:...|..                  .:::.:|::|
Human   126 TEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRRCYTMQEVNSA 190

  Fly   123 FEKITQLKYNQTVSLKDKGYG-ISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSG 186
            ..||..:.|:|.:.|    :| :.:|||::|:.:|.:.|.|            ..:::|..::||
Human   191 LSKIQLVGYSQKIEL----FGAVQVTPLSSGYALGSSNWII------------QSHYEKVSYVSG 239

  Fly   187 CELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQ-------------------TVRNNGN 232
                    .|||.|  :.....||..:..|..::|.:.|                   ||||.||
Human   240 --------SSLLTT--HPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGN 294

  Fly   233 VLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWM-SDKLTKAFE 296
            ||:....:|.:.:|...|.|...:  :||.:..|..::.|:.:.:||::...||: .:|.:|.: 
Human   295 VLVPCYPSGVIYDLLECLYQYIDS--AGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVY- 356

  Fly   297 GARNNPF---------QFKHIQLCH-SLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNAN 351
             ....||         :.||....| ..::.::.|.   ||....|.|..|........|..::.
Human   357 -LPEPPFPHAELIQTNKLKHYPSIHGDFSNDFRQPC---VVFTGHPSLRFGDVVHFMELWGKSSL 417

  Fly   352 NSIILT----------------------------------------------------TRTSPG- 363
            |::|.|                                                    |:..|. 
Human   418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQ 482

  Fly   364 TLAMELVENCAP-------GKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSS- 420
            :..|:|:.:|.|       .:.:.|..:||.     |..|.:....:.|.|:.:||.:...:.| 
Human   483 SHRMDLMIDCQPPAMSYRRAEVLALPFKRRY-----EKIEIMPELADSLVPMEIKPGISLATVSA 542

  Fly   421 --ESEDDIEMSVITGKHDIVVRPEGR---HHSGFFKSNKR-------HHVMFPYHEEKVKCDEY- 472
              .::|:        ||  :::|..|   ..||  |..||       ..|:.|.....:..::: 
Human   543 VLHTKDN--------KH--LLQPPPRPAQPTSG--KKRKRVSDDVPDCKVLKPLLSGSIPVEQFV 595

  Fly   473 ------GEIINLDDYRIA---DATGYEFVPMEEQNKENV---KKEEPGIGAEQQANGGIVDNDVQ 525
                  .::.:|....::   :..|:..:.:|:..|.::   ::.|..|..|:.:...|.|||..
Human   596 QTLEKISQMCSLPSPPLSFLLEQHGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEM 660

  Fly   526 L 526
            |
Human   661 L 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf100NP_651658.1 CPSF2-like_MBL-fold 7..204 CDD:293851 60/274 (22%)
Beta-Casp 243..369 CDD:214983 31/189 (16%)
RMMBL 539..600 CDD:462191
CPSF100_C 617..753 CDD:463836
INTS9NP_001349967.1 Int9-like_MBL-fold 1..265 CDD:293852 64/294 (22%)
Beta-Casp 307..425 CDD:214983 28/124 (23%)
Blue background indicates that the domain is not in the aligned region.

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