| Sequence 1: | NP_651658.1 | Gene: | Cpsf100 / 43426 | FlyBaseID: | FBgn0027873 | Length: | 756 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_008769023.2 | Gene: | Ints9 / 290322 | RGDID: | 1311539 | Length: | 658 | Species: | Rattus norvegicus |
| Alignment Length: | 697 | Identity: | 138/697 - (19%) |
|---|---|---|---|
| Similarity: | 251/697 - (36%) | Gaps: | 229/697 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 IKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFI------------------------ 45
Fly 46 --KELKR---------------------QVHTLDAVLLSHPDAYH-LGALPYLVGKLGLNCPIYA 86
Fly 87 TIPVFKMGQMFMYDLY-----------MSHFNMGDFD------------------LFSLDDVDTA 122
Fly 123 FEKITQLKYNQTVSLKDKGYG-ISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSG 186
Fly 187 CELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQ-------------------TVRNNGN 232
Fly 233 VLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWM-SDKLTKAFE 296
Fly 297 GARNNPF---------QFKHIQLCH-SLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNAN 351
Fly 352 NSIILT----------------------------------------------------TRTSPG- 363
Fly 364 TLAMELVENCAP-------GKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSS- 420
Fly 421 --ESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDY-R 482
Fly 483 IADATGYEFVPMEEQNKENV---KKEEPGIGAEQQANGGIVDNDVQL 526 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cpsf100 | NP_651658.1 | CPSF2-like_MBL-fold | 7..204 | CDD:293851 | 59/274 (22%) |
| YSH1 | 19..400 | CDD:224157 | 107/548 (20%) | ||
| Beta-Casp | 243..369 | CDD:214983 | 29/189 (15%) | ||
| RMMBL | 538..577 | CDD:284853 | |||
| CPSF100_C | 617..753 | CDD:290038 | |||
| Ints9 | XP_008769023.2 | Int9-like_MBL-fold | 1..265 | CDD:293852 | 63/294 (21%) |
| Beta-Casp | 307..425 | CDD:214983 | 26/124 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1236 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||