DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf100 and Cpsf73

DIOPT Version :10

Sequence 1:NP_651658.1 Gene:Cpsf100 / 43426 FlyBaseID:FBgn0027873 Length:756 Species:Drosophila melanogaster
Sequence 2:XP_321933.6 Gene:Cpsf73 / 1281946 VectorBaseID:AGAMI1_008254 Length:690 Species:Anopheles gambiae


Alignment Length:672 Identity:150/672 - (22%)
Similarity:279/672 - (41%) Gaps:149/672 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TSIIKLHTISGAMDESPPCYILQIDDVRILLDCG------------WDEKFDANFIKELKRQVHT 54
            :.::.:..:....:....|.:|:....:|:||||            :.:..||:          .
Mosquito    17 SDLMVIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLIDAD----------Q 71

  Fly    55 LDAVLLSHPDAYHLGALPYLVGKLGL--NC-PIYATIPVFKMGQMFMYDLYMSHFNMG-DFDLFS 115
            :|.:.:||....|.||||:.:.|...  .| ..:||..:::    :|...|:...|:. |..|::
Mosquito    72 IDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYR----WMLSDYIKVSNISTDQMLYT 132

  Fly   116 LDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180
            ..|::.:.|||..:.:::...:    .|:.....||||::|..:: ::::....::|..||:.::
Mosquito   133 EADLEASMEKIETINFHEERDI----LGVRFWAYNAGHVLGAAMF-MIEIAGIRVLYTGDFSRQE 192

  Fly   181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLE 245
            :|||...|:..: ||.:|||::....:...:|..|:.:..:.:.:.|:..|..||.|...||..|
Mosquito   193 DRHLMAAEIPAM-RPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQE 256

  Fly   246 LAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQL 310
            |..:||:.| ::...|....:...::::...:...::.|..|:||:.:..  |.||||.|:.|..
Mosquito   257 LLLILDEYW-SQNPDLQEIPIYYASSLAKKCMAVYQTYINAMNDKIRRQI--AINNPFVFRFISN 318

  Fly   311 CHSL---ADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVEN 372
            ...:   .||     ||.||:||...::||.:|:||..|.::..|.:|:......||||..::  
Mosquito   319 LKGIDHFDDV-----GPCVVMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTIL-- 376

  Fly   373 CAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSSESEDDIEMSVITGKHDI 437
                               .|.||.....|:|| ||           :.|.|.|..|..|     
Mosquito   377 -------------------FEPEEITSMNGQKL-PL-----------NMSVDYISFSAHT----- 405

  Fly   438 VVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENV 502
                :.:..|.|.:..:..||:..:.|:    :|.|.:      :.|....||..|..:....|.
Mosquito   406 ----DYQQTSEFIRLLQPTHVVLVHGEQ----NEMGRL------KSALMREYEANPKVQITFHNP 456

  Fly   503 KKEEP-------------------GIGAE-QQANGGIVDNDVQL-LEKPTKLISQR-KTIEVNAQ 545
            :..:|                   |..|: |:.:|.:|..:.:. |..||.|.... .::.:..|
Mosquito   457 RNTQPVELYFRGEKTAKVMGTLAVGEPADCQRLSGVLVKREFKYHLLAPTDLSKYTDMSMSIVTQ 521

  Fly   546 VQRIDFEGRSDGESMLKILSQLR--PRRVIVIHGTAEGTQVVARHCEQNVGARVFTPQKGEIIDV 608
            .|.|.:.|.:   .:||:|.:..  |..|:.. ...||:...||       .||.     :.||:
Mosquito   522 KQSIHWPGST---VVLKLLLERAGGPGSVVET-PIPEGSTATAR-------LRVC-----DCIDL 570

  Fly   609 TSEIHIYQVRLTEGLVSQLQFQ 630
            |:          :|.:..|::|
Mosquito   571 TA----------DGKIVTLEWQ 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf100NP_651658.1 CPSF2-like_MBL-fold 7..204 CDD:293851 48/212 (23%)
Beta-Casp 243..369 CDD:214983 37/128 (29%)
RMMBL 539..600 CDD:462191 15/62 (24%)
CPSF100_C 617..753 CDD:463836 3/14 (21%)
Cpsf73XP_321933.6 None

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