DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf100 and IntS11

DIOPT Version :10

Sequence 1:NP_651658.1 Gene:Cpsf100 / 43426 FlyBaseID:FBgn0027873 Length:756 Species:Drosophila melanogaster
Sequence 2:XP_319042.4 Gene:IntS11 / 1279335 VectorBaseID:AGAMI1_000330 Length:608 Species:Anopheles gambiae


Alignment Length:616 Identity:147/616 - (23%)
Similarity:251/616 - (40%) Gaps:126/616 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKLHTISGAMDESPPCYILQIDDVRILLDCGW------DEKF-DANFIKELKRQVHTLDAVLLSH 62
            ||:..:....|....|.:|.:....|:||||.      :.:| |.:||.......:.:|.|::||
Mosquito     4 IKITPLGAGQDVGRSCILLSMAGKNIMLDCGMHMGYNDERRFPDFSFIIPEGPITNHIDCVIISH 68

  Fly    63 PDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDL-YMSHFNMGDFDLFSLDDVDTAFEKI 126
            ....|.|||||:...:|...|||.|.|...:..:.:.|: .::....|:.:.|:...:....:|:
Mosquito    69 FHLDHCGALPYMTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTPQMIKDCMKKV 133

  Fly   127 TQLKYNQTVSLKDKGYGISITPLNAGHMIGGTI-WKIVKVGEEDIVYATDFNHKKERHLSGCELD 190
            ..:..:|:|.:..:   :.|....|||::|..: |  ::||.:.:||..|:|...:|||....:|
Mosquito   134 IAVTLHQSVMVDSE---LEIKAYYAGHVLGAAMFW--IRVGSQSVVYTGDYNMTPDRHLGAAWID 193

  Fly   191 RLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWK 255
            :. :|.||||::..|...:..:|.|:...:..:.:.|...|.|||.|...||..||..:|:..|:
Mosquito   194 KC-KPDLLITESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCILLETYWE 257

  Fly   256 NKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKL 320
            ........|....|...:.|   :.|..|.|.:.|:.|.|  .:.|.|.||||:   .....|..
Mosquito   258 RMNLKYPVYFAVGLTEKANN---YYKMFITWTNQKIRKTF--VQRNMFDFKHIK---PFDKGYID 314

  Fly   321 PAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLA------------------- 366
            ..|..||.|:...|.:|.:..:|.:||.|.||.:|:......||:.                   
Mosquito   315 NPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIMPGYCVQGTVGHKILGGAKKVEFENRQVVD 379

  Fly   367 -------------------MELVENCAP-------GKQIELDVRRRVDLEGAELEEYLRTQGEKL 405
                               |:|::.|.|       |:.::::..:....|..::|.|....||..
Mosquito   380 VKMSVEYMSFSAHADAKGIMQLIQFCEPRNVMLVHGEAVKMEFLKEKIREEFKIECYTPANGETC 444

  Fly   406 ---NPL---------IVKPDVEEESSSESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNK---- 454
               .|:         |:|.:| ::.:::..|.....:|   |.|:|          .|.||    
Mosquito   445 TISTPIKIPVETSLSILKDEV-KKYNAQPPDPKRRRII---HGILV----------MKDNKISLM 495

  Fly   455 ------------RHHVMFPYHEEKVKCDEYG-------EIINLDDYRIADATGYEFVPMEEQNKE 500
                        ||.:.|   ..|:|.|:.|       ::.|:.:.|::..|    |.|.:.|..
Mosquito   496 SIDEIFNEAGIDRHVIRF---ISKIKLDDPGPPMRTIEKLYNMLNERLSGWT----VTMNDNNSI 553

  Fly   501 NVKKEEPGIGAEQQ--ANGGIVDNDVQLLEK 529
            ||:.....|..|:|  |.|.:....|..:.|
Mosquito   554 NVESVNIKIETEEQPAAIGSVGQPSVPGMHK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf100NP_651658.1 CPSF2-like_MBL-fold 7..204 CDD:293851 55/205 (27%)
Beta-Casp 243..369 CDD:214983 36/163 (22%)
RMMBL 539..600 CDD:462191
CPSF100_C 617..753 CDD:463836
IntS11XP_319042.4 YSH1 5..416 CDD:440849 106/424 (25%)
INTS11-like_MBL-fold 6..204 CDD:293849 55/203 (27%)
Blue background indicates that the domain is not in the aligned region.

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