DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTB and b4galt1.2

DIOPT Version :9

Sequence 1:NP_651657.1 Gene:beta4GalNAcTB / 43425 FlyBaseID:FBgn0039625 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001016664.1 Gene:b4galt1.2 / 549418 XenbaseID:XB-GENE-1015082 Length:362 Species:Xenopus tropicalis


Alignment Length:321 Identity:106/321 - (33%)
Similarity:165/321 - (51%) Gaps:20/321 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ITLIVYL------CLPF---RFASHYDYIEESKIEGALVPQVTRNVSQQEVFE----C--TYSEI 71
            :.||.||      .|.|   ...|...|.:...|..|.:..::.....:|..|    |  |.:.:
 Frog    37 VVLIYYLSGADFGILQFFRQNQQSQLAYKQNYTISNATMRAISTKGRTKEPKEKLRNCPETSTLL 101

  Fly    72 IAENRFVYHL-AHYHDAVQRGAEIRPGGEFRPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYL 135
            :...:.|:.: ....|..:...::..||.:||:.|.|....|||:|:|.|:|.|..:|.|||..|
 Frog   102 VGPLQIVFSMHVDLEDIRKSNPDVIEGGHYRPKDCNALQKVAIIIPFRNRDEHLKYWLYYMHPIL 166

  Fly   136 PQQLIHYRIFLVEQFDHKPFNRAMLFNIG-AQVAAEYGFPCLILHDVDLLPLNSGQIYACSERPR 199
            .:|.:.|.::::.|...|.||||.|.||| .:...:|.:.|.:..||||:|::....|.|..:||
 Frog   167 KRQQLDYGVYVINQDGDKTFNRAKLLNIGYVESLKDYAYDCFVFSDVDLIPMDDRNTYRCFNQPR 231

  Fly   200 HMSSALDHWRFRLPYRGLFGGVVAINTAQYQQINGMSNLYYGWGGEDDDLYERLQALNIDICRFA 264
            |:|:|:|.:.|.|||...||||.|::..|:.:|||..|.|:||||||||:|.|:.:..:.|.|..
 Frog   232 HLSAAMDKFGFGLPYNQFFGGVSALSKEQFLKINGFPNNYWGWGGEDDDIYNRIASRGMYISRPD 296

  Fly   265 MEFSKYTMLKHKQE---QPNANRVALLRSATLRQHADGLNSLVYTEMERRMHSLFTHILVD 322
            ....:..|::|.::   .||..|..||........:||:|:|.|..:......|:|:|.||
 Frog   297 TLIGRCRMIRHNRDDKNDPNPKRFDLLAHTRQTMDSDGINTLSYKVVSTTRFPLYTYITVD 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTBNP_651657.1 b4GalT 108..322 CDD:132999 82/217 (38%)
b4galt1.2NP_001016664.1 b4GalT 140..357 CDD:132999 82/216 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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