back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment beta4GalNAcTB and B4galt3

DIOPT Version :9

Sequence 1:	NP_651657.1	Gene:	beta4GalNAcTB / 43425	FlyBaseID:	FBgn0039625	Length:	323	Species:	Drosophila melanogaster
Sequence 2:	NP_001009539.1	Gene:	B4galt3 / 494342	RGDID:	1359221	Length:	395	Species:	Rattus norvegicus

Alignment Length:	242	Identity:	97/242 - (40%)
Similarity:	139/242 - (57%)	Gaps:	5/242 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 DAVQRGAEIRPGGEFRPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQF 150
            :.|:|...:..||.:||.||:.|..||||||:|.||..|...|.::|.:|.:|.:.|.|:::.|.
  Rat   102 EIVERNPRVESGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQA 166

  Fly   151 DHKPFNRAMLFNIGAQVA-AEYGFPCLILHDVDLLPLNSGQIYACSER-PRHMSSALDHWRFRLP 213
            .:..||||.|.|:|.:.| .:..:.||.||||||||.|...:|.|..| |||::.|::.:.:.||
  Rat   167 GNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLP 231

  Fly   214 YRGLFGGVVAINTAQYQQINGMSNLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKH--- 275
            |...||||.|:...||.::||..|.|:||||||||:..|::...:.|.|.......|.|:||
  Rat   232 YPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGD 296

  Fly   276 KQEQPNANRVALLRSATLRQHADGLNSLVYTEMERRMHSLFTHILVD 322
            |..:.|.:|..||.........||:|||.|..:.|.:..|:|:|..|
  Rat   297 KGNEENPHRFDLLVRTQNSWTQDGMNSLTYRLLARELGPLYTNITAD 343

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.