DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta4GalNAcTB and B4galt4

DIOPT Version :10

Sequence 1:NP_651657.1 Gene:beta4GalNAcTB / 43425 FlyBaseID:FBgn0039625 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001012018.1 Gene:B4galt4 / 303923 RGDID:1307880 Length:344 Species:Rattus norvegicus


Alignment Length:286 Identity:101/286 - (35%)
Similarity:153/286 - (53%) Gaps:25/286 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KIEGALVPQVTRNVSQQE--VF--ECTYSEIIAENRFVYHLAHYHDAVQRGAEIRPGGEFRPEGC 105
            |.|.|..|.|:.|:..|.  ||  :.|..|:.|:|          ..|.|       |.:|||.|
  Rat    71 KAELANCPSVSPNLRGQNKLVFKPDLTLEEVQAKN----------PKVSR-------GRYRPEEC 118

  Fly   106 QARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHKPFNRAMLFNIG-AQVAA 169
            :|....|:::|:|.||:.|...|.::|.:|.:|.:.|.|:::.|...|.||||.|.|:| .:...
  Rat   119 KALQRVAVLIPHRNREKHLIYLLEHLHPFLQRQQLDYGIYVIHQTGSKKFNRAKLLNVGYLEALK 183

  Fly   170 EYGFPCLILHDVDLLPLNSGQIYACSERPRHMSSALDHWRFRLPYRGLFGGVVAINTAQYQQING 234
            |..:.|.|.|||||:|.|...:|.|.::|:|:....:...:||.|...||||.|::..|:.::||
  Rat   184 EENWDCFIFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGYRLRYSKYFGGVTALSREQFFKVNG 248

  Fly   235 MSNLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKH---KQEQPNANRVALLRSATLRQH 296
            .||.|:|||||||||..|::...:.|.|...:..||||:.|   |..:.|.:|:.||:..:....
  Rat   249 FSNNYWGWGGEDDDLRLRVELHKMKISRPKPDVGKYTMIFHTRDKGNEVNGSRMKLLQQMSRVWK 313

  Fly   297 ADGLNSLVYTEMERRMHSLFTHILVD 322
            .|||:|..|..:....:.|:.:|.||
  Rat   314 TDGLSSCSYRLLSVEHNPLYANITVD 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTBNP_651657.1 b4GalT 108..322 CDD:132999 78/217 (36%)
B4galt4NP_001012018.1 b4GalT 122..339 CDD:132999 78/216 (36%)

Return to query results.
Submit another query.