DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta4GalNAcTB and B4galt1

DIOPT Version :10

Sequence 1:NP_651657.1 Gene:beta4GalNAcTB / 43425 FlyBaseID:FBgn0039625 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_445739.1 Gene:B4galt1 / 24390 RGDID:620900 Length:399 Species:Rattus norvegicus


Alignment Length:238 Identity:91/238 - (38%)
Similarity:137/238 - (57%) Gaps:4/238 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 QRGAEIRPGGEFRPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHK 153
            ::..||:.||.:.|:.|.:.:..|||:|:|.|:|.|..:|.|:|..|.:|.:.|.|:::.|....
  Rat   157 KKNPEIKMGGRYFPKDCISPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDT 221

  Fly   154 PFNRAMLFNIGAQVA-AEYGFPCLILHDVDLLPLNSGQIYACSERPRHMSSALDHWRFRLPYRGL 217
            .||||.|.|:|.|.| .:|.:.|.:..||||:|::....|.|..:|||:|.|:|.:.|.|||...
  Rat   222 MFNRAKLLNVGFQEALKDYDYNCFVFSDVDLIPMDDHNAYRCFSQPRHISVAMDKFGFSLPYVQY 286

  Fly   218 FGGVVAINTAQYQQINGMSNLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKH---KQEQ 279
            ||||.|::..|:..|||..|.|:||||||||::.||....:.|.|......:..|::|   |:.:
  Rat   287 FGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVHKGMSISRPNAVVGRCRMIRHSRDKKNE 351

  Fly   280 PNANRVALLRSATLRQHADGLNSLVYTEMERRMHSLFTHILVD 322
            ||..|...:.........||||||.|..::.:.:.|:|.|.||
  Rat   352 PNPQRFDRIAHTKETMRLDGLNSLTYQVLDIQRYPLYTKITVD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTBNP_651657.1 b4GalT 108..322 CDD:132999 83/217 (38%)
B4galt1NP_445739.1 b4GalT 176..394 CDD:132999 83/217 (38%)

Return to query results.
Submit another query.