DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and AT5G22020

DIOPT Version :9

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001331596.1 Gene:AT5G22020 / 832262 AraportID:AT5G22020 Length:395 Species:Arabidopsis thaliana


Alignment Length:437 Identity:129/437 - (29%)
Similarity:202/437 - (46%) Gaps:89/437 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLAALLKTSLFLVLFLGSLFLLPVLYPS---------TTFP--FEQYFIKPARD-LNGTLELNNH 55
            ||:....|.||..|.|       .||.|         :.||  .....|.|..| :....:..|.
plant     4 FLSPKTITLLFFSLSL-------ALYCSIDPFHHCAISDFPNFVSHEVISPRPDEVPWERDSQNS 61

  Fly    56 LNGARKLWKDQIFGPECLIVLEDKI----YTGIHSGEVIRLNNEESVQ---PITKIGQPCD---- 109
            |..::.|:.:||.|||.  |..|.:    |||:..|.|:..:.|:.:.   ..:...:.||    
plant    62 LQKSKILFFNQIQGPES--VAFDSLGRGPYTGVADGRVLFWDGEKWIDFAYTSSNRSEICDPKPS 124

  Fly   110 ---YIFDDELCGYPVGLALDTQGNNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAK 171
               |:.::.:||.|:||..|.:..:|.::|||.|:.:|..|....|.||...:.:|       ..
plant   125 ALSYLRNEHICGRPLGLRFDKRTGDLYIADAYMGLLKVGPEGGLATPLVTEAEGVP-------LG 182

  Fly   172 LFNSLVISRQGDIFWTDSF----SEDFVFAAFA-NPSGRLFRYDRVKKTNEVLLDELSFANGLAL 231
            ..|.|.|:..|.:::|||.    ..:|:...|: :.:||:.:||.|.|...||:..|.|.||:::
plant   183 FTNDLDIADDGTVYFTDSSISYQRRNFLQLVFSGDNTGRVLKYDPVAKKAVVLVSNLQFPNGVSI 247

  Fly   232 SPSEDFIILAETTAMRLRRYYLKGSRAGESEVFVEGLPGCPDNLTADEEG-IWVPLSVASDSQNP 295
            |....|.:..|.....||||:|||.:||.::||.. |||.|||:..:::| .||.|..     ..
plant   248 SRDGSFFVFCEGDIGSLRRYWLKGEKAGTTDVFAY-LPGHPDNVRTNQKGEFWVALHC-----RR 306

  Fly   296 NLFA-VLAPYPRLRSFLARLVALMRLPLRVLNHIYPNDIAARLFHSF------NDLVIRNAPKRS 353
            |.:: ::|.||:||.|      ::|||           |.||..:||      :.||::.:|:..
plant   307 NYYSYLMARYPKLRMF------ILRLP-----------ITARTHYSFQIGLRPHGLVVKYSPEGK 354

  Fly   354 TV-VRVDWNGNIVRSLHGFDRSASGISHVLEVKGHLYLGSPFNHYVA 399
            .: |..|..|.:|||          :|.|.|..|.|::||...::||
plant   355 LMHVLEDSEGKVVRS----------VSEVEEKDGKLWMGSVLMNFVA 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 80..>284 CDD:225921 68/223 (30%)
Str_synth 174..256 CDD:304606 30/86 (35%)
AT5G22020NP_001331596.1 NHL <68..255 CDD:302697 57/195 (29%)
Str_synth 185..272 CDD:354965 30/86 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I3710
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1870
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757814at2759
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - otm3471
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - O PTHR10426
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.970

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