DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssl2 and AT3G57020

DIOPT Version :10

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_191261.1 Gene:AT3G57020 / 824869 AraportID:AT3G57020 Length:370 Species:Arabidopsis thaliana


Alignment Length:392 Identity:92/392 - (23%)
Similarity:153/392 - (39%) Gaps:104/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TLELNNHLNGAR------KLWKDQIFGPECL-----------IVLEDKI--------------YT 82
            ||.:..:|.||:      |.....:.|||.:           .|::.:|              ||
plant    27 TLIVPENLEGAKNVLTMAKTIPIPVAGPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDFAYT 91

  Fly    83 GIHSGEVIRLNNEESVQPITKIGQPCDYIFDDELCGYPVGLALDTQGNNLIVSDAYYGIWQVDLE 147
            ..|.|..    ::..|.|               .||.|:||..:.:..:|.:.|.|.|:.:|..|
plant    92 SPHRGNC----SKTEVVP---------------TCGRPLGLTFEKKTGDLYICDGYLGLMKVGPE 137

  Fly   148 TKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQGDIFW-TDS-----FSEDFVFAAFANPSGRL 206
            .....::|       .:...|:....|...|..:.|:|: .||     |.:.|..|.....|||:
plant   138 GGLAELIV-------DEAEGRKVMFANQGDIDEEEDVFYFNDSSDKYHFRDVFFVAVSGERSGRV 195

  Fly   207 FRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYLKGSRAGESEVFVEGLPGC 271
            .|||:..|..:|::|.|...|||||:....|:|..|:....:.||::||.:||..::|.: :||.
plant   196 IRYDKKTKEAKVIMDNLVCNNGLALNKDRSFLITCESGTSLVHRYWIKGPKAGTRDIFAK-VPGY 259

  Fly   272 PDNLTADEEG-IWVPLSVASDSQNPNLFA-VLAPYPRLRSFLARLV-ALMRLP--LRVLNHIYPN 331
            |||:.....| .|:.|..     ..||.. ::..|    .:|.:|| ..|:|.  :..:|...|:
plant   260 PDNIRLTSTGDFWIGLHC-----KKNLIGRLIVKY----KWLGKLVEKTMKLEYVIAFINGFKPH 315

  Fly   332 DIAARLFHSFNDLVIRNAPKRSTVVRVDWNGNIVRSLHGFDRSASGISHVLEV----KGHLYLGS 392
            .:|.::...                    .|.::..|.  |:....:.:|.|.    .|.|:.||
plant   316 GVAVKISGE--------------------TGEVLELLE--DKEGKTMKYVSEAYERDDGKLWFGS 358

  Fly   393 PF 394
            .:
plant   359 VY 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 61..>284 CDD:442613 65/254 (26%)
AT3G57020NP_191261.1 YvrE 54..>276 CDD:442613 64/248 (26%)
Str_synth 157..245 CDD:354965 30/87 (34%)

Return to query results.
Submit another query.