DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and AT3G51450

DIOPT Version :9

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_190713.1 Gene:AT3G51450 / 824308 AraportID:AT3G51450 Length:371 Species:Arabidopsis thaliana


Alignment Length:434 Identity:112/434 - (25%)
Similarity:184/434 - (42%) Gaps:95/434 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLAALLKTSLFLVLFLG-SLFLL----PVLYPSTTFPFEQYFIKPARDLNGTLELNNHLNGARKL 62
            |.:..|..|:.:.|.:. :|:.|    |.:.||..|......:.|       |..:..|.||   
plant     5 FSSRSLILSIIVPLLISIALYKLDTFDPAIVPSDAFTSSATSLPP-------LINDEFLTGA--- 59

  Fly    63 WKDQIFGPECLIVLED--------KIYTGIHSGEVIRLNNEESVQPITKIGQPCDYIFDD--ELC 117
               :..|...|.:.||        .||||...|.|.|:...:||.         |.:.:|  ...
plant    60 ---EFIGVGLLNIPEDIAYHKESNLIYTGCVDGWVKRVKVADSVN---------DSVVEDWVNTG 112

  Fly   118 GYPVGLALDTQGNNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQG 182
            |.|:|:|....| .:||:|.:.|:..:..:.||       .::|..:....:.||.:::.::..|
plant   113 GRPLGIAFGIHG-EVIVADVHKGLLNISGDGKK-------TELLTDEADGVKFKLTDAVTVADNG 169

  Fly   183 DIFWTDS--------FSEDFVFAAFANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFII 239
            .:::||:        .|.|.:   ...|.|||..:|...:..:|||.:|.||||:.:||.:..:|
plant   170 VLYFTDASYKYTLNQLSLDML---EGKPFGRLLSFDPTTRVTKVLLKDLYFANGITISPDQTHLI 231

  Fly   240 LAETTAMRLRRYYLKGSRAGESEVFVEGLPGCPDNLTADEEG-IWVPLSVASDSQNPNLFAVLAP 303
            ..||...|..:||:...|.   |||.:.|||.|||:..|.:| .|:.|    .|....|:.:...
plant   232 FCETPMKRCSKYYISEERV---EVFTQSLPGYPDNIRYDGDGHYWIAL----PSGVTTLWNISLK 289

  Fly   304 YPRLRSFLARLVALMRLPLRVLNHIYPNDIAARLFHSFNDLVIRNAPKRSTVVRVDWNGNIVRSL 368
            ||    ||.:|.|::..        |..|:          :.:.||    .|::||.:||.:...
plant   290 YP----FLRKLTAMVAK--------YGVDL----------MFMENA----GVLQVDLDGNPIAYY 328

  Fly   369 HGFDRSASGISHVLEVKGHLYLGSPFNHYVAK---VKLPEEGLK 409
            |  |...|.|:...::..:||.||....::.:   :|.|.:..|
plant   329 H--DPKLSHIATCDKIGKYLYCGSLSQSHILRLDLLKYPAQNKK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 80..>284 CDD:225921 63/214 (29%)
Str_synth 174..256 CDD:304606 26/89 (29%)
AT3G51450NP_190713.1 NHL <52..130 CDD:302697 25/93 (27%)
NHL repeat 69..109 CDD:271320 13/48 (27%)
NHL 92..>226 CDD:302697 38/153 (25%)
NHL repeat 115..153 CDD:271320 11/45 (24%)
NHL repeat 160..213 CDD:271320 12/55 (22%)
Str_synth 161..248 CDD:281131 26/89 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I3710
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1870
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757814at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - O PTHR10426
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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