DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and SSL1

DIOPT Version :10

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_181662.3 Gene:SSL1 / 818729 AraportID:AT2G41300 Length:394 Species:Arabidopsis thaliana


Alignment Length:339 Identity:84/339 - (24%)
Similarity:143/339 - (42%) Gaps:71/339 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 YTGIHSGEVIRLNNEESVQPITKIG-----------QPCDYIFDDELCGYPVGLALDTQGNNLIV 134
            |.|:..|.:::.:.|:       :|           :.|.....:..||.|:||:.:.:..:|..
plant    92 YVGVTDGRILKWSGED-------LGWIEFAYSSPHRKNCSSHKVEPACGRPLGLSFEKKSGDLYF 149

  Fly   135 SDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQGDIFWTDSFSEDF----V 195
            .|.|.|:.:|.    .|..|  ||::: .:...::....|.:.|..:.|..:.:..|:.:    |
plant   150 CDGYLGVMKVG----PKGGL--AEKVV-DEVEGQKVMFANQMDIDEEEDAIYFNDSSDTYHFGDV 207

  Fly   196 FAAF--ANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYLKGSRA 258
            |.||  ...:||..|||:..|..:|::|.|.|.||||||....|::..|.....:.||:.||..|
plant   208 FYAFLCGEKTGRAIRYDKKTKEAKVIMDRLHFPNGLALSIDGSFVLSCEVPTQLVHRYWAKGPNA 272

  Fly   259 GESEVFVEGLPGCPDNLTADEEG-IWVPLSVASDSQNPNLFAVLAPYPRLRSFLARLVA---LMR 319
            |..::|.: |||..||:...|.| .||.           |.:...|:.|| |.:...|.   :..
plant   273 GTRDIFAK-LPGYADNIRRTETGDFWVA-----------LHSKKTPFSRL-SMIHPWVGKFFIKT 324

  Fly   320 LPLRVLNHIY----PNDIAARLFHSFNDLVIRNAPKRSTVVRVDWNGNIVRSLHGFDRSASGISH 380
            |.:.:|..::    |:.:|.:|.....:::                 .|:....|  ::...||.
plant   325 LKMELLVFLFEGGKPHAVAVKLSGKTGEIM-----------------EILEDSEG--KNMKFISE 370

  Fly   381 VLEVKGHLYLGSPF 394
            |.|..|.|:.||.|
plant   371 VQERDGRLWFGSVF 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 61..>284 CDD:442613 60/220 (27%)
SSL1NP_181662.3 YvrE 88..>301 CDD:442613 62/234 (26%)
Str_synth 182..270 CDD:281131 29/87 (33%)

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