DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and Apmap

DIOPT Version :10

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_082253.1 Gene:Apmap / 71881 MGIID:1919131 Length:415 Species:Mus musculus


Alignment Length:413 Identity:136/413 - (32%)
Similarity:216/413 - (52%) Gaps:50/413 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLAALLKTSLFLVLFLGSLFLLPVLYPSTTFPFEQYFIKPARDLNGTLELNNHLNGARKLWKD 65
            |.||  :|..||.:.| ||::.||.......:|.|     |....:.|.|..|..|..|.:|:::
Mouse    40 MTFL--MLAVSLAIPL-LGAMMLLESPIDPQSFSF-----KEPPFMFGVLHPNTKLRQAERLFEN 96

  Fly    66 QIFGPECLIVLEDKIYTGIHSGEVIRLNNEESVQPITKIGQ-PCDYIFDDELCGYPVGLALDTQG 129
            |:.|||.::.:.|.::||...|.|::|.|.| ::.|.:.|. ||....|:..||.|:|:.....|
Mouse    97 QLSGPESIVNIGDVLFTGTADGRVVKLENGE-IETIARFGSGPCKTRDDEPTCGRPLGIRAGPNG 160

  Fly   130 NNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQG-DIFWTDSFSE- 192
             .|.|.|||.|:::|:.:.:...:|:.:|..:.||    :....|.|.::|.| .|::|||.|: 
Mouse   161 -TLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGK----KMSFVNDLTVTRDGRKIYFTDSSSKW 220

  Fly   193 ---DFVFAAF-ANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYL 253
               |::.... |...|||..||.|.|..:||||:|.|.||:.|||.|||:::||||..|:||.|:
Mouse   221 QRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYV 285

  Fly   254 KGSRAGESEVFVEGLPGCPDNL-TADEEGIWVPLSVASDSQNPNLFAVLAPYPRLRSFLARLVAL 317
            .|...|.:::|||.:||.|||: .:...|.||  :.|:...||. |::|       .||:....:
Mouse   286 SGLMKGGADMFVENMPGFPDNIRPSSSGGYWV--AAATIRANPG-FSML-------DFLSDKPFI 340

  Fly   318 MRLPLRVLNHIYPNDIAARLFHSFN-DLVIRNAPKRSTVVRVDWNGNIVRSLHGFD-RSASGISH 380
            .|:                :|..|: :.|::..|:.|.|:.|..:|...||||..| :..:.:|.
Mouse   341 KRM----------------IFKMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSE 389

  Fly   381 VLEVKGHLYLGSPFNHYVAKVKL 403
            ..|..|:|||||..:.::.::.|
Mouse   390 AHEHDGYLYLGSFRSPFICRLSL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 61..>284 CDD:442613 85/230 (37%)
ApmapNP_082253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
YvrE 92..>319 CDD:442613 87/234 (37%)
Str_synth 200..287 CDD:354965 40/86 (47%)
Blue background indicates that the domain is not in the aligned region.

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