DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and Hmu

DIOPT Version :10

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster


Alignment Length:419 Identity:240/419 - (57%)
Similarity:313/419 - (74%) Gaps:9/419 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLAAL-LKTSLFLVLFLGSLFLLPVLYPSTTFPFEQYFIKPARDLNGTLELNNHLNGARKLWK 64
            ||.|.|| ::...|::.|| .:.|:|.|.|.|||||:.|.:.|.:||.|.||.|.||.||.:|.:
  Fly     1 MGLLYALRVRIMNFMIFFL-LIILMPGLPPRTTFPFKDYIVTPPKDLKGALESNFHLEGAERLLE 64

  Fly    65 DQIFGPECLIVLEDKIYTGIHSGEVIRLNNEESVQPITKIGQPCDYIFDDELCGYPVGLALDTQG 129
            .:::||||||...::||||||.||||:|.:.. |..:|||||||:.|:::..||.|:|||.||||
  Fly    65 GRVYGPECLIARNNEIYTGIHGGEVIKLTSNH-VTHVTKIGQPCEDIYEESRCGRPLGLAFDTQG 128

  Fly   130 NNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQGDIFWTDSFS--- 191
            ||||::|||||:|||||.|.|||:||...|.|.||..||.||:||.:.:|::||::||||.|   
  Fly   129 NNLIIADAYYGLWQVDLGTNKKTLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSSDFT 193

  Fly   192 -EDFVFAAFANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYLKG 255
             ||.|||:|||||||||:|:|.|..:|||||||:|||||||||:||||::|||.||||.:|:|||
  Fly   194 IEDLVFASFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAMRLTKYHLKG 258

  Fly   256 SRAGESEVFVEGLPGCPDNLTADEEGIWVPLSVASDSQNPNLFAVLAPYPRLRSFLARLVALMRL 320
            ::||:|||||:||||.|||||.|.|||||||..::||::||.|.:...:|.:|.||||::||..|
  Fly   259 AKAGQSEVFVDGLPGLPDNLTPDAEGIWVPLVQSADSEHPNGFTLFTRFPSVRLFLARMLALFEL 323

  Fly   321 PLRVLNHIYPNDIAARLFHSFNDL--VIRNAPKRSTVVRVDWNGNIVRSLHGFDRSASGISHVLE 383
            |.|.||.:|||..:.|..|....:  :...||||:||||||||||||.||||||:||:.:|||||
  Fly   324 PFRYLNSVYPNKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGSLHGFDKSAATVSHVLE 388

  Fly   384 VKGHLYLGSPFNHYVAKVKLPEEGLKSVK 412
            .:..|:||||.|.|:|:||.|:....::|
  Fly   389 FQDFLFLGSPTNQYLARVKSPKAKQPTLK 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 61..>284 CDD:442613 143/226 (63%)
HmuNP_477159.1 YvrE 61..>287 CDD:442613 143/226 (63%)

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