DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and F57C2.5

DIOPT Version :9

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_497019.2 Gene:F57C2.5 / 175112 WormBaseID:WBGene00010197 Length:391 Species:Caenorhabditis elegans


Alignment Length:418 Identity:114/418 - (27%)
Similarity:185/418 - (44%) Gaps:48/418 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLKT--SLFLVLFLGSLFLLPVLY----PSTTFPFEQYFIKPARDLNGTLELNNHLNGARKLWKD 65
            :.||  ..|...|:|.|.....||    ........:|...|...|.|.|.:|..|..|..:...
 Worm     1 MCKTMGKFFFFGFVGLLLSWGALYYRYSDEKNTSARKYRFDPPPALVGNLFINAGLEKAEHILDG 65

  Fly    66 QIFGPECLIVLEDKIYTGIHSGEVI-----RLNNEESVQPITKIGQPCDYIFDDELCGYPVGLAL 125
            :|.|||.::|.::.||..::..:|:     |:.::.|....:|....|.:...:..||.|:|:..
 Worm    66 KIVGPESMVVDDEAIYVSVNDAKVLKIVDGRVVSKASYSEKSKFFPDCGHFDTEPECGRPLGIRR 130

  Fly   126 DTQGN-NLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGA--NRRAKLFNSLVISRQGDIFWT 187
            ...|. ..:|.|||.|::.||...::..:   :.|||..|..  ..:.:..|.|.:..:.::..:
 Worm   131 LVAGKPKFVVCDAYLGVYIVDFTDEQNPI---STQILDSKVPIDGLKPRFLNDLDVISEDELIIS 192

  Fly   188 DSFS----EDFVFAAFANPS-GRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMR 247
            ||.:    ..|:.|...:.: ||:|......|:.:||.|:|.|.||:.|:..:..:|.||.:..|
 Worm   193 DSSTRHDRRHFMAAILEHQADGRIFHLKISTKSVKVLADKLYFPNGIQLTEDKKSVIFAECSMAR 257

  Fly   248 LRRYYLKGSRAGESEVFVEGLPGCPDNLTADEEG-IWVPLSVASDSQNPNLFAVLAPYPRLRSFL 311
            :::..:...:.   |:|...|||.|||:.:...| .||.|:....:.:|:|...|...|.:|.||
 Worm   258 IKKLTIASKKV---EMFAANLPGLPDNIRSSGRGTYWVGLTATRSATHPSLLDRLGSLPGIRQFL 319

  Fly   312 ARLVALMRLPLRVLNHIYPNDIAARLFHSFNDLVIRNAPKRSTVVRVDWNGNIVRSLHGF-DRSA 375
            ..:|              |......|...|.:       ..|.::.:|..|.||||||.. .:..
 Worm   320 VDIV--------------PGPYWKPLLGLFKN-------PHSIIIELDSVGKIVRSLHDVTGKHV 363

  Fly   376 SGISHVLEVKGHLYLGSPFNHYVAKVKL 403
            ...|.|.|..||||:||..:||:|||||
 Worm   364 GDASQVTEHNGHLYIGSFADHYIAKVKL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 80..>284 CDD:225921 54/217 (25%)
Str_synth 174..256 CDD:304606 22/86 (26%)
F57C2.5NP_497019.2 YvrE 70..>292 CDD:225921 57/227 (25%)
Str_synth 179..260 CDD:281131 22/80 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167766
Domainoid 1 1.000 70 1.000 Domainoid score I6228
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I3165
Isobase 1 0.950 - 0 Normalized mean entropy S5287
OMA 1 1.010 - - QHG48544
OrthoDB 1 1.010 - - D336287at33208
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - mtm4790
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - O PTHR10426
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.860

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