DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wat and FAR1

DIOPT Version :9

Sequence 1:NP_651652.2 Gene:wat / 43420 FlyBaseID:FBgn0039620 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_197642.1 Gene:FAR1 / 832311 AraportID:AT5G22500 Length:491 Species:Arabidopsis thaliana


Alignment Length:509 Identity:138/509 - (27%)
Similarity:235/509 - (46%) Gaps:83/509 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ESPMQMFYKDKGVFLTGGTGFFGKIIIEKLLRV-TEVGQIYLLIRTKKGKDAFARIE------DL 86
            ||....|..:|.:.:||..||..|:::||:||: ..|.:||||:|....|.|..|:.      ||
plant     2 ESNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDL 66

  Fly    87 F--------NDPVFAKMKQVNPKYRCQITIISGDCSLPGLGI-SADERETIMENVNIVLHSAATV 142
            |        .|.:.|.|::       :|..:.||.|:..||: ..|..:.:...::|:::.|||.
plant    67 FKVLRNNLGEDNLNALMRE-------KIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATT 124

  Fly   143 RFDEKLKMAIAINVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMRH--IQERFYSG-TMSGENA 204
            .|||:..:.:.||..|...::..||:.|..:.|:|||||:.......  :::.|..| |:||:..
plant   125 NFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETLSGDRE 189

  Fly   205 F--------------KLSECLDEHTLNT-----LTPTIIKGYPNTYTFTKVLAENVVQQSAQNLP 250
            .              :|.:|.||....|     :....:.|:||||.|||.:.|.::.:..:|||
plant   190 LDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEMLMGKYRENLP 254

  Fly   251 VTIFRPGIVITTYREPVTGWIDNMYGPCGVIVGIGSGVLRVFTGDMDNKAHIVPVDMCVNALLAS 315
            :.|.||.::.:|..||..|||:.:.....|||..|.|.|:.|..|.::...::|.||.|||::|:
plant   255 LVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAA 319

  Fly   316 AWDIARNKYET--PPIYNYVPDAENMVTWRRYMEDGFEYGCDIPM----RKSIWYPRFTIVPHMW 374
            |   ..:..:|  ..||:.....:|.||:.:..:....|....|:    ...|...:.||:..|.
plant   320 A---TAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIGRNGSPIIVVKGTILSTMA 381

  Fly   375 QYHILCFLYHTLPALVMDAIMVI-----------IGKK----PRMMKIYRKIHKLSNVLKYFSSN 424
            |:.:...|.:.||..::..|.::           :.:|    .|::::|:.......:       
plant   382 QFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIKLAMRLVELYQPYLLFKGI------- 439

  Fly   425 EFRFDNDNVRKLTEKLDDRDKRL---FAFDMRDLDWTN-LFRVSLYGLRLYVVK 474
               ||:.|..:|..|..:..|.|   |.||.:.:||.| :....:.||..:|:|
plant   440 ---FDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPGLITHVLK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
watNP_651652.2 PLN02996 35..474 CDD:215538 135/501 (27%)
FAR-N_SDR_e 39..342 CDD:187547 103/342 (30%)
FAR_C 382..472 CDD:176924 22/108 (20%)
FAR1NP_197642.1 PLN02996 1..490 CDD:215538 137/507 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41718
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.960

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