DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wat and MS2

DIOPT Version :9

Sequence 1:NP_651652.2 Gene:wat / 43420 FlyBaseID:FBgn0039620 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_187805.1 Gene:MS2 / 820372 AraportID:AT3G11980 Length:616 Species:Arabidopsis thaliana


Alignment Length:559 Identity:134/559 - (23%)
Similarity:237/559 - (42%) Gaps:140/559 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MNGMKSLE--DHCQLISDVKDESPMQMFYKDKGVFLTGGTGFFGKIIIEKLLRVT-EVGQIYLLI 71
            :||:|:|.  ....::. :|:...:..|.:.|...:||.|||..|::|||:||:. :|.:|||||
plant   101 INGVKTLMPFSGASMVG-MKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLI 164

  Fly    72 RTKKGKDAFARIE-DLFNDPVFAKMKQVN-PKYR----CQITIISGDCSLPGLGISADERETIME 130
            :.|..:.|..|:: ::.:..:|..:|:.: ..|.    .::..::|:.....:|:.||..|.|.:
plant   165 KAKSKEAAIERLKNEVLDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQADSAEEIAK 229

  Fly   131 NVNIVLHSAATVRFDEKLKMAIAINVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMR-HIQERF 194
            .|:::::|||...|:|:..:|:.||..|...::..||:...||..:.||||:.:...: .|.|:.
plant   230 EVDVIINSAANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKP 294

  Fly   195 YS---------------------------------GTMSGENAFKLSECLDEHTLNTLTPTIIKG 226
            :|                                 ||.:.:.|.|:.:...|...:       .|
plant   295 FSMGDCIATENFLEGNRKALDVDREMKLALEAARKGTQNQDEAQKMKDLGLERARS-------YG 352

  Fly   227 YPNTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWID--NMYGPCGVIVGIGSGVL 289
            :.:||.|||.:.|.::..:..::||.|.||.::.:||::|..||::  .|..|  :::..|.|.|
plant   353 WQDTYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDP--IVLCYGKGQL 415

  Fly   290 RVFTGDMDNKAHIVPVDMCVNALLASAWDIARNKYETPP---IYNYVPDAENMVTWRRYMEDGFE 351
            ..|..|......:||.||.|||.||:.........:..|   :|.....|.|.:.:....|    
plant   416 TGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAE---- 476

  Fly   352 YGCDIPMRKSIWYPRFTIVPHMWQYHILCFLYHTLPALVM--DAIMVIIGKKPRMMKIYRKI--- 411
                                      :|...|.|.|.:..  |.|||      |:||::..:   
plant   477 --------------------------LLYNHYKTSPCMDSKGDPIMV------RLMKLFNSVDDF 509

  Fly   412 ----------------------HKLSNVLKYFSSNEF------------------RFDNDNVRKL 436
                                  .|:...||:......                  ||||.|.::|
plant   510 SDHLWRDAQERSGLMSGMSSVDSKMMQKLKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQRL 574

  Fly   437 TEKLDDRDKRLFAFDMRDLDWTN-LFRVSLYGLRLYVVK 474
            .|.:.:.:||.|.||:..::||: :..|.:.|||.:|:|
plant   575 MENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVLK 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
watNP_651652.2 PLN02996 35..474 CDD:215538 128/530 (24%)
FAR-N_SDR_e 39..342 CDD:187547 93/348 (27%)
FAR_C 382..472 CDD:176924 31/135 (23%)
MS2NP_187805.1 PLN02503 1..616 CDD:215279 134/559 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

Return to query results.
Submit another query.