DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wat and Far2

DIOPT Version :9

Sequence 1:NP_651652.2 Gene:wat / 43420 FlyBaseID:FBgn0039620 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:494 Identity:166/494 - (33%)
Similarity:268/494 - (54%) Gaps:28/494 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SPMQMFYKDKGVFLTGGTGFFGKIIIEKLLRVT-EVGQIYLLIRTKKGKDAFARIEDLFNDPVFA 93
            |.:..||.:|.:.:||.|||.||:::|||.|.: .:..||:|:|.|.|:....|:..:.|..:|.
Mouse     2 SMIAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFE 66

  Fly    94 KMKQVNPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMAIAINVHG 158
            |:|:|.|....:|..||.|.:.....||.::.:.::...||:.|.|||||||..|:.|:.:||..
Mouse    67 KVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTA 131

  Fly   159 TKEIIKLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSGENAFKLSECLDEHTLNTLTPTI 223
            |::::.:|.::..|:|.:|:||||::||:.||.|..|...:.........|.||:..:..:||.:
Mouse   132 TQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKL 196

  Fly   224 IKGYPNTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWIDNMYGPCGVIVGIGSGV 288
            |...|||||:||.|.|.||||.:.||.|.|.||.||..|::||..||:||:.||.|:|:..|.|.
Mouse   197 IGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGF 261

  Fly   289 LRVFTGDMDNKAHIVPVDMCVNALLASAWDIARNKYETPPIYNYVPDAENMVTWRRYMEDGFEYG 353
            ||.........|.::|||..||..:|..|..|.::.::..||:......|...|       ::.|
Mouse   262 LRSIKATPMAVADVIPVDTVVNLTIAVGWYTAVHRPKSTLIYHSTSGNLNPCNW-------YKMG 319

  Fly   354 CD-------IPMRKSIWYPR--FT---IVPHMWQYHILCFLYHTLPALVMDAIMVIIGKKPRMMK 406
            ..       ||...:...|.  ||   ...|.|.     .:.|.:||::.|..:.:.|:||||:|
Mouse   320 LQVLATIEKIPFESAFRRPNADFTTSNFTTHYWN-----TVSHRVPAIIYDFYLRLTGRKPRMLK 379

  Fly   407 IYRKIHKLSNVLKYFSSNEFRFDNDNVRKLTEKLDDRDKRLFAFDMRDLDWTNLFRVSLYGLRLY 471
            :..::.|..::|:||.::.:.:..:|...|..:|...|:|:|.||:|.|:|.......:.|::.|
Mouse   380 LMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKY 444

  Fly   472 VVKDDPSNIPESIKRYERLKVLHYT-TLAVFYALAAWAL 509
            ::|:|.:.||::.:...||:.:||. ..|:|  |..|.|
Mouse   445 LLKEDLAGIPKAKQHLRRLRNIHYLFNTALF--LIIWRL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
watNP_651652.2 PLN02996 35..474 CDD:215538 152/451 (34%)
FAR-N_SDR_e 39..342 CDD:187547 114/303 (38%)
FAR_C 382..472 CDD:176924 26/89 (29%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 114/303 (38%)
Sterile 357..447 CDD:397244 27/89 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847930
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.750

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