DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wat and Far1

DIOPT Version :9

Sequence 1:NP_651652.2 Gene:wat / 43420 FlyBaseID:FBgn0039620 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:487 Identity:170/487 - (34%)
Similarity:279/487 - (57%) Gaps:22/487 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FYKDKGVFLTGGTGFFGKIIIEKLLR-VTEVGQIYLLIRTKKGKDAFARIEDLFNDPVFAKMKQV 98
            :|:.|.:.|||.|||.||:::||||| ..:|..:|:|:|.|.|:....|:|::.:..:|.:::..
  Rat     7 YYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRLRDE 71

  Fly    99 NPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMAIAINVHGTKEII 163
            ||.:|.:|..|:.:.:.|.|.:|.:::|.|:::.|::.|.||||||:|.|:.|:.:||..|:::|
  Rat    72 NPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLI 136

  Fly   164 KLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSGENAFKLSECLDEHTLNTLTPTIIKGYP 228
            .||:::.||:..:|||||:|:||.:||.|..|...:..:......|.:|:..:|.:||.:|...|
  Rat   137 LLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201

  Fly   229 NTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWIDNMYGPCGVIVGIGSGVLRVFT 293
            |||.:||.|||.||||....|.|.|.||.||..:::||..|||||..||.|:.:..|.|:||...
  Rat   202 NTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMR 266

  Fly   294 GDMDNKAHIVPVDMCVNALLASAWDIARNKYETPPIYNYVPDAENMVTWRR---YMEDGFEYGCD 355
            ...:..|.:||||:.||..||:||....|:.....:||....:.|...|..   |:...|:..  
  Rat   267 ASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKTN-- 329

  Fly   356 IPMRKSIWYP--RF---TIVPHMWQYHILCFLYHTLPALVMDAIMVIIGKKPRMMKIYRKIHKLS 415
             |:.:...:|  :|   .::.|.|:     .:.||:|||::|..:.:.|:||.|||...::||..
  Rat   330 -PLNQVFRHPYVKFYSNNLMLHYWK-----GVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAM 388

  Fly   416 NVLKYFSSNEFRFDNDNVRKLTEKLDDRDKRLFAFDMRDLDWTNLFRVSLYGLRLYVVKDDPSNI 480
            ..|:||:||.:.::.|||..|..:|:..||:.|..|:|.|.|.........|.:.||:.::.|.:
  Rat   389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGL 453

  Fly   481 PESIKRYERLKVLHY--TTLAVFYALAAWALY 510
            |.:.|...:|:.:.|  .|:.|   :..|.::
  Rat   454 PAARKHLNKLRNIRYGFNTILV---ILIWRIF 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
watNP_651652.2 PLN02996 35..474 CDD:215538 162/447 (36%)
FAR-N_SDR_e 39..342 CDD:187547 119/303 (39%)
FAR_C 382..472 CDD:176924 32/89 (36%)
Far1NP_001011933.1 PLN02996 2..446 CDD:215538 161/446 (36%)
FAR-N_SDR_e 11..330 CDD:187547 122/321 (38%)
Sterile 371..447 CDD:281068 28/75 (37%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351490
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41718
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100550
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.650

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