DRSC/TRiP Functional Genomics Resources

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Protein Alignment wat and far1

DIOPT Version :10

Sequence 1:NP_651652.2 Gene:wat / 43420 FlyBaseID:FBgn0039620 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:486 Identity:163/486 - (33%)
Similarity:269/486 - (55%) Gaps:17/486 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FYKDKGVFLTGGTGFFGKIIIEKLLR-VTEVGQIYLLIRTKKGKDAFARIEDLFNDPVFAKMKQV 98
            ||:.|.|.:||.|||.||:::||||| ...|..:|:|:|.|..:....|:.::.:..:|.:::..
 Frog     7 FYRGKNVLITGATGFMGKVLLEKLLRSCPNVKAVYVLVRPKASQKPRERVAEMMSCKLFDRLRDE 71

  Fly    99 NPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMAIAINVHGTKEII 163
            .|:...::..||.:.:.|.|.:|.::::.:::.::||.|.||||||:|.|:.|:.:||..|::::
 Frog    72 QPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIATRQLL 136

  Fly   164 KLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSGENAFKLSECLDEHTLNTLTPTIIKGYP 228
            .||::|..|:..:|||||:|:||.:.|:|..|...:..:...:..|.:|:..:|.:||.:|...|
 Frog   137 YLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPPPVDPKKLIESLEWMDDGLVNDITPKLIGDRP 201

  Fly   229 NTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWIDNMYGPCGVIVGIGSGVLRVFT 293
            ||||:||.|||.||||....|.:.|.||.||..:::||..|||||..||.|:.:..|.|:||...
 Frog   202 NTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMR 266

  Fly   294 GDMDNKAHIVPVDMCVNALLASAWDIARNKYETPP---IYNYVPDAENMVTW---RRYMEDGFEY 352
            ...:..|.::|||:.||..||:||....|:|..|.   :||......|...|   ..::...|:.
 Frog   267 ASNNAVADLIPVDVVVNTTLAAAWYSGVNRYSRPRNILVYNCTTGGTNPFHWGEVEYHVISTFKR 331

  Fly   353 GCDIPMRKSIWYPRFTIVPHMWQYHILCFLYHTLPALVMDAIMVIIGKKPRMMKIYRKIHKLSNV 417
            .   |:.::...|...:..:...||....:.|..||.:.|..:.|.|:.|||||...::||...:
 Frog   332 N---PLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDVYLRITGRSPRMMKTITRLHKAMML 393

  Fly   418 LKYFSSNEFRFDNDNVRKLTEKLDDRDKRLFAFDMRDLDWTNLFRVSLYGLRLYVVKDDPSNIPE 482
            |:||:||.:.::|:|...|..:|...||:.|.||:|.|.|.........|.:.||:.::.|.:|.
 Frog   394 LEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENYCMGTKKYVLNEEMSGLPA 458

  Fly   483 SIKRYERLKVLHY---TTLAVFYALAAWALY 510
            :.|...:|:.:.|   |.|.|.    .|.::
 Frog   459 ARKHLNKLRNIRYGFNTILVVL----IWRVF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
watNP_651652.2 FAR-N_SDR_e 39..342 CDD:187547 113/306 (37%)
FAR_C 382..472 CDD:176924 31/89 (35%)
far1XP_017948360.1 FAR-N_SDR_e 11..333 CDD:187547 115/324 (35%)
Sterile 360..450 CDD:460779 33/89 (37%)

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