DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-gamma and Kirrel3

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_006510620.1 Gene:Kirrel3 / 67703 MGIID:1914953 Length:803 Species:Mus musculus


Alignment Length:439 Identity:94/439 - (21%)
Similarity:160/439 - (36%) Gaps:112/439 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STLFVILIMATKCGSGSTQNQHHESSSQLDPDPEFIGFINNVTYPAGREAILACSVR-----NLG 66
            ||||:                   |...::.....:....|...|.|:|..:...::     ||.
Mouse   210 STLFI-------------------SPGDVENGQSIVCRATNKAIPGGKETSVTIDIQHPPLVNLS 255

  Fly    67 KNKVGWLRASDQTVLALQGRVVT-HNARISVMHQDMHTWKLKISKLRESDRGCYMCQINTSPMKK 130
                    ...|.|  |:..:|| |.:..:......:.|..:...::|:....|...::.:...:
Mouse   256 --------VEPQPV--LEDNIVTFHCSAKANPAVTQYRWAKRGHIIKEASGELYRTTVDYTYFSE 310

  Fly   131 QVGC--------------IDVQVPPDIINEESSADLAVQEGEDATLTCKATGNPQPRVTWRREDG 181
            .|.|              :||...|.:.:|..|  |.|..|.||..:|...|||...:.|.:...
Mouse   311 PVSCEVTNALGSTNLSRTVDVYFGPRMTSEPQS--LLVDLGSDAVFSCAWIGNPSLTIVWMKRGS 373

  Fly   182 EMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAV---SKRVSLSVQFAPM 243
            .::|              .|..:|.|..:.:...|.|:|.|   |.|.|   .:.|:|:|...|:
Mouse   374 GVVL--------------SNEKTLTLKSVRQEDAGKYVCRA---VVPRVGAGEREVTLTVNGPPI 421

  Fly   244 VRAPSQLLGTPLGSDVQLECQVEASPSP--VSY-WLKGARTSNGFASVSTASLESGSPGPEMLLD 305
            : :.:|......|...|::|.:.::|.|  ::: |.:..             ||||:.|      
Mouse   422 I-SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENV-------------LESGTSG------ 466

  Fly   306 GPKYGITERRDGYRGVM-LLVVRSFSPSDVGT-YHCVSTNSLGRAEGTLRL----YEIKLHPGAS 364
              :|.: |..:...||: .|.:.:...:|..| |:|.:.||.|.....:||    .|:|...|..
Mouse   467 --RYTV-ETVNTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMKSGAGLE 528

  Fly   365 ASNDDHLNYIGGLEEAARNAGRSNRTTWQPLLAMLMLLWMRLSLR-TGG 412
            |.:......||    .|..||    ..:..|:|.::......|.| |||
Mouse   529 AESVPMAVIIG----VAVGAG----VAFLVLMATIVAFCCARSQRSTGG 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 19/111 (17%)
Ig 47..129 CDD:299845 15/87 (17%)
Ig 140..238 CDD:299845 26/100 (26%)
IG_like 247..355 CDD:214653 26/116 (22%)
Ig 256..351 CDD:299845 23/99 (23%)
Kirrel3XP_006510620.1 IG_like 54..143 CDD:214653
Ig strand A' 56..60 CDD:409353
Ig strand B 64..71 CDD:409353
Ig strand C 78..82 CDD:409353
Ig strand C' 84..87 CDD:409353
Ig strand D 97..101 CDD:409353
Ig strand E 104..116 CDD:409353
Ig strand G 132..143 CDD:409353
IgI_2_KIRREL3-like 149..246 CDD:409416 9/54 (17%)
Ig strand B 166..170 CDD:409416
Ig strand C 180..184 CDD:409416
Ig strand E 210..214 CDD:409416 3/3 (100%)
Ig strand F 224..229 CDD:409416 0/4 (0%)
Ig strand G 239..242 CDD:409416 1/2 (50%)
Ig <267..334 CDD:416386 10/66 (15%)
Ig strand B 267..274 CDD:409353 3/6 (50%)
Ig strand C 279..286 CDD:409353 1/6 (17%)
Ig strand C' 288..291 CDD:409353 0/2 (0%)
Ig strand D 298..302 CDD:409353 1/3 (33%)
Ig strand E 304..310 CDD:409353 0/5 (0%)
Ig strand G 321..334 CDD:409353 2/12 (17%)
Ig 335..416 CDD:416386 26/99 (26%)
Ig strand A' 343..347 CDD:409353 2/5 (40%)
Ig strand B 350..360 CDD:409353 3/9 (33%)
Ig strand C 365..371 CDD:409353 1/5 (20%)
Ig strand E 381..387 CDD:409353 2/5 (40%)
IgI_5_KIRREL3 418..515 CDD:409479 26/119 (22%)
Ig strand B 436..440 CDD:409479 1/3 (33%)
Ig strand C 450..454 CDD:409479 0/3 (0%)
Ig strand E 481..485 CDD:409479 1/3 (33%)
Ig strand F 496..501 CDD:409479 2/4 (50%)
Ig strand G 509..512 CDD:409479 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.