DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and sdk1a

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:342 Identity:86/342 - (25%)
Similarity:128/342 - (37%) Gaps:93/342 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FINN---VTYPAGREAIL-ACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQDMHTW 104
            ||:|   .|...||.||| :.:|....:.:|.|.|         .|..:..:.||::..::    
Zfish   214 FIDNDQRKTVTQGRAAILNSPAVSCFPRPQVTWFR---------DGYKIIPSNRIAITLEN---- 265

  Fly   105 KLKISKLRESDRGCYMCQ----------------INTSPMKKQVGCIDVQVPPD------IINEE 147
            :|.:.....||.|.|..|                :|.:..||..|..|.:.|.|      :|...
Zfish   266 QLVVLGTAASDAGRYYVQAVNEKNGENKTSPSIYLNVAANKKYRGSHDSEAPADPVAPVIVIPPR 330

  Fly   148 SSADLAVQEG-EDATLTCKATGNPQPRVT--WRREDGEMILIRKPGSRELMKVESYNGSSLRLLR 209
            ::..:|   | .:|||.|.|...|..:::  |||..              ::|.|..||..|.|.
Zfish   331 NTTVVA---GISEATLECVANARPVEKLSLVWRRNG--------------VEVASGVGSFSRRLT 378

  Fly   210 L---ERRQMGAYLC---IASNDVPPAVSKRVSLSVQFAPMVRA-PSQLLGTPLGSDVQLECQVEA 267
            :   ....:|.|:|   :..:.|.|| ..|..||:..||...| |.:.:...:...|.::||...
Zfish   379 IINPTSTDVGMYVCEALLLDSSVKPA-EARAFLSITEAPYFTAEPRRKMMGEVEKSVDIQCQARG 442

  Fly   268 SPSPVSYWLKGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPS 332
            .|.|...|.|.|                   .|...|:.|:|.|...       |.|.||...||
Zfish   443 VPMPKLEWYKDA-------------------VPLSKLNNPRYKIISS-------MGLQVRKLQPS 481

  Fly   333 DVGTYHCVSTNSLGRAE 349
            |.|.:.|.:.||.|.|:
Zfish   482 DAGIFQCFARNSAGEAQ 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 25/111 (23%)
Ig 47..129 CDD:299845 21/101 (21%)
Ig 140..238 CDD:299845 28/112 (25%)
IG_like 247..355 CDD:214653 27/103 (26%)
Ig 256..351 CDD:299845 26/94 (28%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653 19/92 (21%)
Ig 236..287 CDD:299845 13/63 (21%)
Ig_3 322..394 CDD:290638 21/88 (24%)
I-set 323..412 CDD:254352 26/106 (25%)
I-set 416..505 CDD:254352 29/109 (27%)
Ig 436..500 CDD:299845 25/89 (28%)
I-set 510..600 CDD:254352
Ig 527..600 CDD:299845
I-set 605..693 CDD:254352
Ig 610..693 CDD:299845
FN3 697..788 CDD:238020
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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