DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and igsf9a

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_005155702.1 Gene:igsf9a / 557459 ZFINID:ZDB-GENE-060503-288 Length:1619 Species:Danio rerio


Alignment Length:329 Identity:85/329 - (25%)
Similarity:133/329 - (40%) Gaps:70/329 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 AILACSVRNLGKNK------VGWLRASDQTVLALQGRV-----VTHNARISVMHQDMHTWKLKIS 109
            |:|.||:....|:.      :.|:|....|.:.:|..|     ..::.|:|:....    .|::|
Zfish    37 AVLPCSLPAPQKDSSASQYVIEWVRQGFDTPIFMQLGVHPRVHPDYDGRVSLFGGT----SLQMS 97

  Fly   110 KLRESDRGCYMCQI----NTSPMKKQVGC---IDVQVPPDIINEESSADLAVQEGEDATLTCKAT 167
            .|:..|.|.|.|:|    .|:......|.   :.|..|| ::.|.|..::.|..|...||.|.|.
Zfish    98 GLQLEDEGWYECRI
LPLDQTTEEAGSSGSWTRLSVTAPP-VLTETSPPEVEVFVGRSLTLKCAAQ 161

  Fly   168 GNPQPRVTWRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAVSK 232
            |||:|.:||.: ||..|   ||..    ||:..|| |:....:.|...|.|.|..||....| :.
Zfish   162 GNPRPTITWSK-DGAPI---KPQH----KVKMVNG-SVSFHAVSREAAGQYQCYTSNSEGNA-TH 216

  Fly   233 RVSLSVQFAPMVRAPSQLLGTPLGSDVQLECQVEASPSPVSY-WLKGARTSNGFASVSTASLESG 296
            ...|.:...|::..|.......:..|.:|:||.||.|..::| |.:        ..|....::|.
Zfish   217 VTRLK
IIGPPVIIIPPSDTVLNMSQDAKLKCQAEADPPNMTYVWQR--------QGVDIYHIDSL 273

  Fly   297 SPGPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGTLRLYEIKLHP 361
            ....::::||                .|::...:|.|.|.|.|:.||.|            .:.|
Zfish   274 KSRIKVIVDG----------------TLLISRLAPEDSGNYTCMPTNGL------------PVSP 310

  Fly   362 GASA 365
            .|||
Zfish   311 SASA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 23/100 (23%)
Ig 47..129 CDD:299845 21/87 (24%)
Ig 140..238 CDD:299845 34/97 (35%)
IG_like 247..355 CDD:214653 23/108 (21%)
Ig 256..351 CDD:299845 22/95 (23%)
igsf9aXP_005155702.1 IG_like 27..110 CDD:214653 18/76 (24%)
Ig 35..111 CDD:299845 19/77 (25%)
I-set 140..221 CDD:254352 31/90 (34%)
IGc2 151..212 CDD:197706 27/69 (39%)
Ig 233..318 CDD:299845 26/118 (22%)
I-set 233..318 CDD:254352 26/118 (22%)
Ig <349..402 CDD:299845
IG_like 423..502 CDD:214653
Ig 435..498 CDD:143165
FN3 507..602 CDD:238020
fn3 614..696 CDD:278470
PHA02666 1105..>1312 CDD:222914
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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